aboutsummaryrefslogtreecommitdiff
path: root/test/rest-api.org
diff options
context:
space:
mode:
authorPjotr Prins2020-07-21 11:38:33 +0100
committerPjotr Prins2020-07-21 11:38:33 +0100
commit86f31ef60f65a820bf9ac25c3fc01c88f2a9ebfe (patch)
tree49ccf8a36ac1acb96d41a23630784341d2fb288a /test/rest-api.org
parenta259e9a1da5c56c100292c1cb4c5ef7941596611 (diff)
downloadbh20-seq-resource-86f31ef60f65a820bf9ac25c3fc01c88f2a9ebfe.tar.gz
bh20-seq-resource-86f31ef60f65a820bf9ac25c3fc01c88f2a9ebfe.tar.lz
bh20-seq-resource-86f31ef60f65a820bf9ac25c3fc01c88f2a9ebfe.zip
Updated REST API doc
Diffstat (limited to 'test/rest-api.org')
-rw-r--r--test/rest-api.org7
1 files changed, 4 insertions, 3 deletions
diff --git a/test/rest-api.org b/test/rest-api.org
index 6dd6616..4b66147 100644
--- a/test/rest-api.org
+++ b/test/rest-api.org
@@ -77,6 +77,7 @@ requests.get(baseURL+"/api/sample/MT533203.1.json").json()
#+end_src
#+RESULTS:
+| collection | : | http://collections.lugli.arvadosapi.com/c=0015b0d65dfd2e82bb3cee4436bf2893+126 | date | : | 2020-04-27 | fasta | : | http://collections.lugli.arvadosapi.com/c=0015b0d65dfd2e82bb3cee4436bf2893+126/sequence.fasta | id | : | MT533203.1 | info | : | http://identifiers.org/insdc/MT533203.1#sequence | mapper | : | minimap v. 2.17 | sequencer | : | http://www.ebi.ac.uk/efo/EFO_0008632 | specimen | : | http://purl.obolibrary.org/obo/NCIT_C155831 |
@@ -108,11 +109,11 @@ requests.get(baseURL+"/api/ebi/sample-MT326090.1.xml").text
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>sequencing method</TAG>
- <VALUE></VALUE>
+ <VALUE>http://purl.obolibrary.org/obo/OBI_0000759</VALUE>
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>collection date</TAG>
- <VALUE></VALUE>
+ <VALUE>2020-03-21</VALUE>
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>geographic location (latitude)</TAG>
@@ -134,7 +135,7 @@ requests.get(baseURL+"/api/ebi/sample-MT326090.1.xml").text
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>environment (material)</TAG>
- <VALUE></VALUE>
+ <VALUE>http://purl.obolibrary.org/obo/NCIT_C155831</VALUE>
</SAMPLE_ATTRIBUTE>
<SAMPLE_ATTRIBUTE>
<TAG>ENA-CHECKLIST</TAG>