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authorAndreaGuarracino2020-08-29 00:23:51 +0200
committerAndreaGuarracino2020-08-29 00:23:51 +0200
commit7067de8cfe0607fcae13360b80a3763b86f9664c (patch)
treeca946f02d1e4c112794375f4136287bb5cf8d5cf /scripts
parentef4e55ce81448088b1e730a12d6772ebc01ce8af (diff)
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fixed few countries ontology terms; added a new species
Diffstat (limited to 'scripts')
-rw-r--r--scripts/dict_ontology_standardization/ncbi_countries.csv12
-rw-r--r--scripts/dict_ontology_standardization/ncbi_host_species.csv1
2 files changed, 7 insertions, 6 deletions
diff --git a/scripts/dict_ontology_standardization/ncbi_countries.csv b/scripts/dict_ontology_standardization/ncbi_countries.csv
index 4e838bf..400d732 100644
--- a/scripts/dict_ontology_standardization/ncbi_countries.csv
+++ b/scripts/dict_ontology_standardization/ncbi_countries.csv
@@ -611,12 +611,12 @@ USA:KS,http://www.wikidata.org/entity/Q1558
USA:KY,http://www.wikidata.org/entity/Q1603
USA:LA,http://www.wikidata.org/entity/Q65
USA:Los Angeles,http://www.wikidata.org/entity/Q65
-"USA:SLIDELL, LA",http://www.wikidata.org/wiki/Q988156
-"USA:Slidell, LA",http://www.wikidata.org/wiki/Q988156
-"USA:Seattle, WA",http://www.wikidata.org/wiki/Q5083
-"USA:New Orleans, LA",http://www.wikidata.org/wiki/Q34404
-"USA:NEW ORLEANS, LA",http://www.wikidata.org/wiki/Q34404
-"USA:New Orleans, Louisiana",http://www.wikidata.org/wiki/Q34404
+"USA:SLIDELL, LA",http://www.wikidata.org/entity/Q988156
+"USA:Slidell, LA",http://www.wikidata.org/entity/Q988156
+"USA:Seattle, WA",http://www.wikidata.org/entity/Q5083
+"USA:New Orleans, LA",http://www.wikidata.org/entity/Q34404
+"USA:NEW ORLEANS, LA",http://www.wikidata.org/entity/Q34404
+"USA:New Orleans, Louisiana",http://www.wikidata.org/entity/Q34404
USA:MA,http://www.wikidata.org/entity/Q771
USA:Massachusetts,http://www.wikidata.org/entity/Q771
USA:MD,http://www.wikidata.org/entity/Q1391
diff --git a/scripts/dict_ontology_standardization/ncbi_host_species.csv b/scripts/dict_ontology_standardization/ncbi_host_species.csv
index 2add179..c21cb13 100644
--- a/scripts/dict_ontology_standardization/ncbi_host_species.csv
+++ b/scripts/dict_ontology_standardization/ncbi_host_species.csv
@@ -10,3 +10,4 @@ Felis catus,http://purl.obolibrary.org/obo/NCBITaxon_9685
Felis catus; Domestic Shorthair,http://purl.obolibrary.org/obo/NCBITaxon_9685
Panthera tigris jacksoni,http://purl.obolibrary.org/obo/NCBITaxon_419130
Canis lupus familiaris,http://purl.obolibrary.org/obo/NCBITaxon_9615
+Neovison vison,http://purl.obolibrary.org/obo/NCBITaxon_452646