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| author | AndreaGuarracino | 2020-11-13 22:41:47 +0100 |
|---|---|---|
| committer | AndreaGuarracino | 2020-11-13 22:41:47 +0100 |
| commit | 0d7f1bc0000df215e85f0da1143703e311328dea (patch) | |
| tree | 2615907b92ca783512209cfa7eef629de4fc9ce3 /scripts/download_genbank_data | |
| parent | cb94ded3ea7d28a81ab41fc88ffd291bc0f8c079 (diff) | |
| download | bh20-seq-resource-0d7f1bc0000df215e85f0da1143703e311328dea.tar.gz bh20-seq-resource-0d7f1bc0000df215e85f0da1143703e311328dea.tar.lz bh20-seq-resource-0d7f1bc0000df215e85f0da1143703e311328dea.zip | |
fix check date sra script
Diffstat (limited to 'scripts/download_genbank_data')
| -rwxr-xr-x | scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py | 1 |
1 files changed, 0 insertions, 1 deletions
diff --git a/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py b/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py index 1352027..442a9a5 100755 --- a/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py +++ b/scripts/download_genbank_data/from_genbank_to_fasta_and_yaml.py @@ -409,7 +409,6 @@ for path_metadata_xxx_xml in [os.path.join(dir_metadata, name_metadata_xxx_xml) year, month, day = [int(x) for x in info_for_yaml_dict['sample']['collection_date'].split('-')] collection_date_in_yaml = datetime(year, month, day) - if collection_date_in_yaml < min_acceptable_collection_date: if accession_version not in not_created_accession_dict: not_created_accession_dict[accession_version] = [] |