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| author | AndreaGuarracino | 2020-08-28 10:37:28 +0200 |
|---|---|---|
| committer | AndreaGuarracino | 2020-08-28 10:37:28 +0200 |
| commit | 22f997f59da74c842b6be2a8f4f53e5aa116472e (patch) | |
| tree | c2422941725b7d899443a5d93f7155ea5320577b /bh20sequploader/validation | |
| parent | 4299c750728bbad4bdbf0311ff2a4b9c65d9883c (diff) | |
| download | bh20-seq-resource-22f997f59da74c842b6be2a8f4f53e5aa116472e.tar.gz bh20-seq-resource-22f997f59da74c842b6be2a8f4f53e5aa116472e.tar.lz bh20-seq-resource-22f997f59da74c842b6be2a8f4f53e5aa116472e.zip | |
fixed local QC, modifying the regex for FASTA/FASTQ to be more general
Diffstat (limited to 'bh20sequploader/validation')
| -rw-r--r-- | bh20sequploader/validation/formats | 4 | ||||
| -rw-r--r-- | bh20sequploader/validation/formats.mgc | bin | 1032 -> 1021 bytes |
2 files changed, 2 insertions, 2 deletions
diff --git a/bh20sequploader/validation/formats b/bh20sequploader/validation/formats index ac804cf..0f61dc4 100644 --- a/bh20sequploader/validation/formats +++ b/bh20sequploader/validation/formats @@ -1,4 +1,4 @@ -0 regex \^\>.+\r?\n([acgtnACGTN]+\r?\n)*[acgtnACGTN]+(\r?\n)?$ FASTA +0 regex \^\>.+\r?\n([A-Za-z]+\r?\n)*[A-Za-z]+(\r?\n)?$ FASTA !:mime text/fasta -0 regex \^@.+\r?\n[acgtnACGTN]*\n\\+.*\n[!-i]*(\r\n)? FASTQ +0 regex \^@.+\r?\n[A-Za-z]*\n\\+.*\n[!-i]*(\r\n)? FASTQ !:mime text/fastq
\ No newline at end of file diff --git a/bh20sequploader/validation/formats.mgc b/bh20sequploader/validation/formats.mgc Binary files differindex bff282a..ee9748c 100644 --- a/bh20sequploader/validation/formats.mgc +++ b/bh20sequploader/validation/formats.mgc |