diff options
| author | Peter Amstutz | 2020-07-08 17:10:10 -0400 |
|---|---|---|
| committer | Peter Amstutz | 2020-07-08 17:10:10 -0400 |
| commit | e821857e7a9403739f321feb7418d33d6bd8b2c7 (patch) | |
| tree | 1b72a737b50e60346aefaf009ac2488d45c8abe0 /bh20sequploader/qc_metadata.py | |
| parent | bfcebbd349687ebe2d1d47185db9fda38803b674 (diff) | |
| download | bh20-seq-resource-e821857e7a9403739f321feb7418d33d6bd8b2c7.tar.gz bh20-seq-resource-e821857e7a9403739f321feb7418d33d6bd8b2c7.tar.lz bh20-seq-resource-e821857e7a9403739f321feb7418d33d6bd8b2c7.zip | |
Give uploader an option to trust local validation (for batch imports)upload-download-status
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Diffstat (limited to 'bh20sequploader/qc_metadata.py')
| -rw-r--r-- | bh20sequploader/qc_metadata.py | 10 |
1 files changed, 5 insertions, 5 deletions
diff --git a/bh20sequploader/qc_metadata.py b/bh20sequploader/qc_metadata.py index 0a0c780..27657b1 100644 --- a/bh20sequploader/qc_metadata.py +++ b/bh20sequploader/qc_metadata.py @@ -16,12 +16,12 @@ def qc_metadata(metadatafile): if metadata_schema is None: schema_resource = pkg_resources.resource_stream(__name__, "bh20seq-schema.yml") cache = {"https://raw.githubusercontent.com/arvados/bh20-seq-resource/master/bh20sequploader/bh20seq-schema.yml": schema_resource.read().decode("utf-8")} - metadata_schema = schema_salad.schema.load_schema("https://raw.githubusercontent.com/arvados/bh20-seq-resource/master/bh20sequploader/bh20seq-schema.yml", cache=cache) + metadata_schema = schema_salad.schema.load_schema("https://raw.githubusercontent.com/arvados/bh20-seq-resource/master/bh20sequploader/bh20seq-schema.yml", cache=cache) - (document_loader, - avsc_names, - schema_metadata, - metaschema_loader) = metadata_schema + (document_loader, + avsc_names, + schema_metadata, + metaschema_loader) = metadata_schema shex = pkg_resources.resource_stream(__name__, "bh20seq-shex.rdf").read().decode("utf-8") |