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authorAndreaGuarracino2020-11-04 16:21:39 +0100
committerAndreaGuarracino2020-11-04 16:21:39 +0100
commitd0ca18169487d3fd28530096a273ca1f840873ba (patch)
treebec80a987eb65e8ae96a50f946b8b87f175e9bc8 /bh20sequploader/bh20seq-schema.yml
parentf616b4200a5a72c0c9cd0ee911d5048b67cdcca2 (diff)
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added the assembly_method field to distinguish de-novo assemblies from reference-based approaches #94new_assembly_method_field
Diffstat (limited to 'bh20sequploader/bh20seq-schema.yml')
-rw-r--r--bh20sequploader/bh20seq-schema.yml5
1 files changed, 5 insertions, 0 deletions
diff --git a/bh20sequploader/bh20seq-schema.yml b/bh20sequploader/bh20seq-schema.yml
index 861a5ca..7406f94 100644
--- a/bh20sequploader/bh20seq-schema.yml
+++ b/bh20sequploader/bh20seq-schema.yml
@@ -178,6 +178,11 @@ $graph:
- name: technologySchema
type: record
fields:
+ assembly_method:
+ doc: Assembly method refers to how the reads were assembled into contigs for which either a de novo or mapping (reference based) strategy is used.
+ type: string
+ jsonldPredicate:
+ _id: http://purl.obolibrary.org/obo/GENEPIO_0000090
sample_sequencing_technology:
doc: Technology that was used to sequence this sample (e.g Sanger, Nanopor MiniION)
type: string[]