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| author | Peter Amstutz | 2020-11-09 17:32:05 -0500 |
|---|---|---|
| committer | GitHub | 2020-11-09 17:32:05 -0500 |
| commit | 74d46196ae69c0c557f64593910ada48d84b3654 (patch) | |
| tree | 57c7df946e1aa1f2054eb49379439ebee4d4c0e6 /bh20seqanalyzer | |
| parent | b311e2ec0f1d02cf16152855dd8bdd760ed4578b (diff) | |
| parent | 98a80bd64d8a495b8fddffdef6e07e5a3fbea1e3 (diff) | |
| download | bh20-seq-resource-74d46196ae69c0c557f64593910ada48d84b3654.tar.gz bh20-seq-resource-74d46196ae69c0c557f64593910ada48d84b3654.tar.lz bh20-seq-resource-74d46196ae69c0c557f64593910ada48d84b3654.zip | |
Merge pull request #105 from arvados/fasta-subset-from-query
Extract subset of the all-sequences fasta by running a sparql query.
Also includes some tweaks to the permalinks.
Diffstat (limited to 'bh20seqanalyzer')
| -rw-r--r-- | bh20seqanalyzer/main.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/bh20seqanalyzer/main.py b/bh20seqanalyzer/main.py index 5f00080..0906958 100644 --- a/bh20seqanalyzer/main.py +++ b/bh20seqanalyzer/main.py @@ -215,7 +215,7 @@ class SeqAnalyzer: most_recent_analysis = self.api.groups().list(filters=[['owner_uuid', '=', self.pangenome_analysis_project]], order="created_at desc").execute() for m in most_recent_analysis["items"]: - wf = self.get_workflow_output_from_project(m["uuid"], "arv-main.cwl") + wf = self.get_workflow_output_from_project(m["uuid"], "collect-seqs.cwl") if wf is None: continue src = self.api.collections().get(uuid=wf["output_uuid"]).execute() |