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authorAdam Novak2020-04-10 16:43:05 -0700
committerAdam Novak2020-04-10 16:46:02 -0700
commit04912c58cdab27962429be56971afde189d702c4 (patch)
treea42ce55ffb20572a139c25111a85a9376781cf1d /README.md
parenta0feaff212f5e4c030dc231a23f8df704ac3aa53 (diff)
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Clarify supported formats and make web UI take FASTQ
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@@ -126,10 +126,10 @@ For running/developing the uploader with GNU Guix see [INSTALL.md](./doc/INSTALL
# Usage
-Run the uploader with a FASTA file and accompanying metadata file in [JSON-LD format](https://json-ld.org/):
+Run the uploader with a FASTA or FASTQ file and accompanying metadata file in JSON or YAML:
```sh
-bh20-seq-uploader example/sequence.fasta example/metadata.json
+bh20-seq-uploader example/sequence.fasta example/metadata.yaml
```
## Workflow for Generating a Pangenome