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| -rw-r--r-- | pyhegp/pyhegp.py | 12 |
1 files changed, 12 insertions, 0 deletions
diff --git a/pyhegp/pyhegp.py b/pyhegp/pyhegp.py index aa4b3fe..a35cfcb 100644 --- a/pyhegp/pyhegp.py +++ b/pyhegp/pyhegp.py @@ -109,5 +109,17 @@ def encrypt(genotype_file, summary_file, key_file, ciphertext_file): np.savetxt(key_file, key, delimiter=",", fmt="%f") np.savetxt(ciphertext_file, encrypted_genotype, delimiter=",", fmt="%f") +@main.command() +@click.option("--output", "-o", "output_file", + type=click.File("wb"), + default="-", + help="output file") +@click.argument("ciphertext-files", type=click.File("rb"), nargs=-1) +def cat(output_file, ciphertext_files): + np.savetxt(output_file, + np.vstack([read_genotype(file) for file in ciphertext_files]), + delimiter=",", + fmt="%f") + if __name__ == "__main__": main() |