Age | Commit message (Collapse) | Author |
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* Makefile.am (%.dot): Use ccwl to build %.dot from %.scm instead of
cwltool to build %.dot from %.cwl.
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* ccwl/yaml.scm (indent-level): Import (ccwl utils). Move to ...
* ccwl/utils.scm (indent-level): ... here.
Export indent-level.
* ccwl/graphviz.scm: New file.
* Makefile.am (SOURCES): Register it.
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This factorization is required to support other compilation targets
such as graphviz, bash, scheme, etc.
* ccwl/cwl.scm: New file.
* Makefile.am (SOURCES): Register it.
* ccwl/ccwl.scm (ccwl): Export command?, command-inputs,
command-outputs, command-args, command-stdin, command-other,
workflow?, workflow-steps, workflow-inputs, workflow-outputs,
workflow-other, input?, input-id, input-type, input-label,
input-default, input-position, input-prefix, input-other, output?,
output-id, output-type, output-binding, output-source, output-other,
step?, step-id, step-run, step-in, step-out, unspecified-default?.
(<workflow>): New type.
(filter-alist): Move to cwl.scm.
(make-workflow): Refactor into workflow->cwl-scm in cwl.scm.
(output->cwl): Move to cwl.scm as output->cwl-scm.
(command->cwl): Move to cwl.scm as command->cwl-scm.
(workflow-steps): Rename to collect-steps. Clarify docstring.
(workflow): Use collect-steps instead of workflow-steps. Explicitly
pass empty list as other argument of make-workflow. Add TODO note to
implement it properly.
* scripts/ccwl.in: Import (ccwl cwl) instead of (ccwl yaml). Use
workflow->cwl instead of scm->yaml.
* tests/ccwl.scm ("stdin input should not have inputBinding"): Use
command->cwl-scm from (ccwl cwl) instead of command->cwl from (ccwl
ccwl).
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* Makefile.am (website/index.html): Depend on
build-aux/build-home-page.el.
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* Makefile.am (CLEANFILES): Add doc/*.out.
(CLEAN_DIRECTORIES): Add doc/cwl-output.
(GENERATE_CWL_OUTPUT): New variable.
(doc/capture-output-file.out,
doc/capture-output-file-with-parameter-reference.out,
doc/capture-stdout.out, doc/checksum.out,
doc/decompress-compile-run.out, doc/hello-world.out,
doc/pass-stdin.out, doc/hello.tar.out): New targets.
* doc/capture-output-file-with-parameter-reference.out,
doc/capture-output-file.out, doc/capture-stdout.out, doc/checksum.out,
doc/decompress-compile-run.out, doc/hello-world.out,
doc/hello.tar.out, doc/pass-stdin.out: Delete files.
* build-aux/generate-cwl-output.sh.in, doc/hello.c.gz, doc/hello.tar,
doc/hello.txt: New files.
* configure.ac: Configure build-aux/generate-cwl-output.sh.
* doc/ccwl.skb (Tutorial)[Passing input into the standard input stream
of a command]: Replace file "foo" with "hello.txt".
* .gitignore: Add build-aux/generate-cwl-output.sh, doc/*.out and
doc/cwl-output.
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* Makefile.am (CLEANFILES): Clean *.dot, not %.dot.
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* Makefile.am: Set indent-tabs-mode to t.
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* tests/utils.scm: New file.
* Makefile.am (SCM_TESTS): Register it.
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This will be useful when we want build-home-page.el to build both a
website and a gemini capsule.
* build-aux/build-home-page.el (build-website): New function.
* Makefile.am (website/index.html): Call build-website.
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* Makefile.am (CURRENT_RELEASE): New variable.
(release, $(CURRENT_RELEASE), %.asc): New rules.
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Since we only have a top-level Makefile, top_builddir and builddir are
the same. Use builddir in the interest of brevity.
* Makefile.am (%.go, SCM_LOG_DRIVER, doc/ccwl.info, doc/ccwl.html):
Replace top_builddire with builddir.
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* Makefile.am (SKRIBILO_FLAGS): Add --image-path=$(builddir).
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PNG images are supported by both the info and html engines.
* doc/ccwl.skb (Tutorial)[Workflow with multiple steps]: Use PNG
images instead of SVG.
* Makefile.am (CLEANFILES): Replace doc/*.svg with doc/*.png.
(%.svg): Delete rule.
(%.png): New rule.
* .gitignore: Replace doc/*.svg with doc/*.png.
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* Makefile.am (SKRIBILO_FLAGS): New variable.
(doc/ccwl.info, doc/ccwl.html): Pass $(SKRIBILO_FLAGS) to skribilo.
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* Makefile.am (EXTRA_DIST): Add doc/skribilo.scm, doc/ccwl.skb,
$(DOC_OTHER).
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* bootstrap.sh: Generate .depends.
* Makefile.am: Include .depends with automake, not with make.
(.depends): Delete rule.
(doc/ccwl.html, doc/ccwl.info): Use DOC_OTHER instead of
DOC_OTHER_DEPENDENCIES.
(CLEANFILES): Remove .depends.
* build-aux/find-dependencies.scm: Output DOC_OTHER instead of
DOC_OTHER_DEPENDENCIES. _DEPENDENCIES variables are special in
automake.
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* Makefile.am (CLEANFILES): Add .depends, website/index.html.
(CLEAN_DIRECTORIES): Add doc/ccwl.html, website/manual.
(clean-local): Delete $(CLEAN_DIRECTORIES) only.
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* Makefile.am (SKRIBILO_BUILD_DIR): Delete variable.
(CLEANFILES): Add doc/*.cwl, doc/*.dot, doc/*.svg, doc/ccwl.info,
doc/skribilo.go.
($(SKRIBILO_BUILD_DIR)/%.cwl): Rename to %.cwl.
(info-local, install-info-local): Depend on doc/ccwl.info instead of
$(SKRIBILO_BUILD_DIR)/ccwl.info.
(html-local, install-html-local, website/manual/dev/en): Depend on
doc/ccwl.html instead of $(SKRIBILO_BUILD_DIR)/ccwl.html.
($(SKRIBILO_BUILD_DIR)/ccwl.info): Rename to doc/ccwl.info.
($(SKRIBILO_BUILD_DIR)/ccwl.html): Rename to doc/ccwl.html.
(clean-local): Do not delete doc/skribilo.go and
$(SKRIBILO_BUILD_DIR).
* .gitignore: Add doc/*.cwl, doc/*.html, doc/*.info, doc/*.svg. Remove
doc/skribilo.
* doc/ccwl.skb (Tutorial)[Workflow with multiple steps]: Reference
images in the doc directory instead of in the doc/skribilo directory.
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There are so few that it makes no sense to list them one on a line.
* Makefile.am (SOURCES, SCM_TESTS): List files in a single line.
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The website directory is checked into the git repository and need not
be created.
* Makefile.am (website/index.html): Do not create website directory.
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* Makefile.am (CCWL_GEN*, CWLTOOL_GEN*, DOT_GEN*, EMACS_GEN*,
GUILD_GEN*, SKRIBILO_GEN*): New variables.
(%.go): Prefix with GUILD_GEN instead of AM_V_GEN.
($(SKRIBILO_BUILD_DIR)/%.cwl): Prefix with CCWL_GEN instead of
AM_V_GEN.
(%.dot): Prefix with CWLTOOL_GEN instead of AM_V_GEN.
(%.svg): Prefix with DOT_GEN.
($(SKRIBILO_BUILD_DIR)/ccwl.info, $(SKRIBILO_BUILD_DIR)/ccwl.html):
Prefix with SKRIBILO_GEN instead of AM_V_GEN.
(website/index.html): Prefix with EMACS_GEN.
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* ccwl/skribilo.scm: Move to ...
* doc/skribilo.scm: ... here.
* doc/ccwl.skb: Import (doc skribilo) instead of (ccwl skribilo).
* Makefile.am ($(SKRIBILO_BUILD_DIR)/ccwl.info,
$(SKRIBILO_BUILD_DIR)/ccwl.html): Depend on doc/skribilo.go instead of
ccwl/skribilo.go.
* Makefile.am (clean-local): Delete doc/skribilo.go instead of
ccwl/skribilo.go.
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* Makefile.am ($(SKRIBILO_BUILD_DIR)/ccwl.info,
$(SKRIBILO_BUILD_DIR)/ccwl.html): Depend on ccwl/skribilo.go instead
of ccwl/skribilo.scm.
* Makefile.am (clean-local): Delete ccwl/skribilo.go.
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* Makefile.am: Comment on use of install-data-local,
install-info-local, install-html-local and uninstall-local targets.
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* build-aux/find-dependencies.scm: New file.
* Makefile.am (DOC_IMAGES): Delete variable.
(.depends): New target. Include it in the Makefile.
($(SKRIBILO_BUILD_DIR)/ccwl.info, $(SKRIBILO_BUILD_DIR)/ccwl.html):
Depend on DOC_OTHER_DEPENDENCIES.
(clean-local): Delete .depends.
* .gitignore: Add .depends.
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* Makefile.am (clean-local): Delete entire website manual directory.
(website/manual/dev/en): Create directory before copying files.
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* Makefile.am (DOC_IMAGES): Add checksum.svg and
decompres-compile-run.svg.
* doc/ccwl.skb (Tutorial)[Workflow with multiple steps]: Add workflow
graphs checksum.svg and decompres-compile-run.svg.
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* configure.ac: Search for cwltool, dot and sed.
* Makefile.am (DOC_IMAGES): New variable.
($(SKRIBILO_BUILD_DIR)/%.cwl, %.dot, %.svg): New rules.
($(SKRIBILO_BUILD_DIR)/ccwl.info): Depend on $(DOC_IMAGES).
($(SKRIBILO_BUILD_DIR)/ccwl.html): Depend on $(DOC_IMAGES). Build HTML
into a directory. Copy $(DOC_IMAGES) into that directory.
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* Makefile.am ($(SKRIBILO_BUILD_DIR)/ccwl.info,
$(SKRIBILO_BUILD_DIR)/ccwl.html): Depend on skribilo config
ccwl/skribilo.scm.
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* configure.ac: Search for emacs.
* Makefile.am: Use EMACS set by configure.
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* Makefile.am (website/index.html): Use MKDIR_P instead of `mkdir -p'.
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* Makefile.am (website/manual/dev/en): Delete directory before
rebuilding.
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That way, there is no need to copy it when building the website.
* Makefile.am (website/style.css): Delete target.
(website): Do not depend on the website/style.css target.
(clean-local): Clean up only website/index.html and
website/manual/dev/en, not the entire website directory.
* style.css: Move to website/style.css.
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* doc/ccwl.texi: Delete file.
* ccwl/skribilo.scm, doc/ccwl.skb,
doc/capture-output-file-with-parameter-reference.out,
doc/capture-output-file-with-parameter-reference.scm,
doc/capture-output-file.out, doc/capture-output-file.scm,
doc/capture-stdout.out, doc/capture-stdout.scm, doc/checksum.out,
doc/checksum.scm, doc/decompress-compile-run.out,
doc/decompress-compile-run.scm, doc/hello-world.out,
doc/hello-world.scm, doc/hello.tar.out: New files.
* configure.ac: Check for skribilo.
* Makefile.am: Unregister doc/ccwl.texi. Add documentation build
rules.
* guix.scm (ccwl)[native-inputs]: Replace texinfo with skribilo.
* .gitignore: Add doc/skribilo. Remove doc/version.texi, doc/*.html,
doc/*.info.
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* Makefile.am (website/manual/dev/en): New target.
(website): Require website/manual/dev/en.
(AM_MAKEINFOHTMLFLAGS): Add --css-ref=/style.css to include CSS.
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* Makefile.am (website/style.css): New target.
(website): Require website/style.css.
* style.css: New file.
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* Makefile.am (website, website/index.html, clean-local): New targets.
* build-aux/build-home-page.el: New file.
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Suffix rules are deprecated and should not be used. Pattern rules are
clearer and more general.
* Makefile.am: Replace suffix rule to build scheme files with pattern
rule.
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* Makefile.am (bin_SCRIPTS): Add scripts/ccwl.
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* doc/ccwl.texi: New file.
* Makefile.am (bin_SCRIPTS): Add doc/ccwl.texi.
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* build-aux/test-driver.scm.in: New file.
* configure.ac: Generate build-aux/test-driver.scm.
* Makefile.am (TEST_EXTENSIONS): Add .scm.
(SCM_TESTS): Add tests/ccwl.scm and tests/yaml.scm.
(TESTS): Set to SCM_TESTS.
(EXTRA_DIST): Distribute test files.
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* Makefile.am, bootstrap.sh, configure.ac, pre-inst-env.in: New files.
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