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2021-06-19website: Set foreground color to black.•••We want a high contrast black text on white background. * website/style.css (body): Unset color property. Arun Isaac
2021-06-19website: Italicize code symbols.•••* website/style.css (code): Italicize. Arun Isaac
2021-06-19website: Add background color and padding to code snippets.•••* website/style.css (pre): Add background color and padding. Arun Isaac
2021-06-19README: Remove broken link to tutorial.•••* README.org (Documentation): Remove broken link to tutorial. Arun Isaac
2021-06-19.gitignore: Add files.•••* .gitignore: Add build-aux/test-driver.scm and website. Arun Isaac
2021-06-19Makefile: Let info and html targets depend on skribilo config.•••* Makefile.am ($(SKRIBILO_BUILD_DIR)/ccwl.info, $(SKRIBILO_BUILD_DIR)/ccwl.html): Depend on skribilo config ccwl/skribilo.scm. Arun Isaac
2021-06-19doc: Link to source for pipe and tee.•••* doc/ccwl.skb (Tutorial)[Workflow with multiple steps]: Link to source for pipe and tee. Arun Isaac
2021-06-19ccwl: Add source links.•••* ccwl/skribilo.scm: Import (rnrs io ports), (ice-9 match), (ice-9 regex) and (srfi srfi-171). (%source-uri-base): New variable. (source-ref): New public function. Arun Isaac
2021-06-19configure: Search for emacs.•••* configure.ac: Search for emacs. * Makefile.am: Use EMACS set by configure. Arun Isaac
2021-06-19Makefile: Use MKDIR_P instead of `mkdir -p'.•••* Makefile.am (website/index.html): Use MKDIR_P instead of `mkdir -p'. Arun Isaac
2021-06-19Makefile: Delete manual directory before rebuilding.•••* Makefile.am (website/manual/dev/en): Delete directory before rebuilding. Arun Isaac
2021-06-19website: Move CSS into the website directory.•••That way, there is no need to copy it when building the website. * Makefile.am (website/style.css): Delete target. (website): Do not depend on the website/style.css target. (clean-local): Clean up only website/index.html and website/manual/dev/en, not the entire website directory. * style.css: Move to website/style.css. Arun Isaac
2021-06-15website: Make SVG badges clickable.•••* style.css (object): Set pointer-events to none. Arun Isaac
2021-06-15doc: Move documentation from texinfo to skribilo.•••* doc/ccwl.texi: Delete file. * ccwl/skribilo.scm, doc/ccwl.skb, doc/capture-output-file-with-parameter-reference.out, doc/capture-output-file-with-parameter-reference.scm, doc/capture-output-file.out, doc/capture-output-file.scm, doc/capture-stdout.out, doc/capture-stdout.scm, doc/checksum.out, doc/checksum.scm, doc/decompress-compile-run.out, doc/decompress-compile-run.scm, doc/hello-world.out, doc/hello-world.scm, doc/hello.tar.out: New files. * configure.ac: Check for skribilo. * Makefile.am: Unregister doc/ccwl.texi. Add documentation build rules. * guix.scm (ccwl)[native-inputs]: Replace texinfo with skribilo. * .gitignore: Add doc/skribilo. Remove doc/version.texi, doc/*.html, doc/*.info. Arun Isaac
2021-06-10build-aux: Do not override org-html--svg-image.•••SVG image export works correctly out of the box in org. * build-aux/build-home-page.el (org-html--svg-image): Delete function. Arun Isaac
2021-06-10pre-inst-env: Handle absent environment variables.•••* pre-inst-env.in (prepend-path-env!): Handle case when environment variable is absent and getenv returns #f. Arun Isaac
2021-06-10README: Do not use org macros.•••Unfortunately, GitHub's org exporter does not support macros. * README.org (ci-badge): Delete macro. Replace ci-badge macro invocations with expansions. Arun Isaac
2021-06-10README: Add continuous integration badges.•••* README.org (ci-badge): New macro. Add continuous integration badges. * build-aux/build-home-page.el (org-html--svg-image): Override org-html--svg-image to export svg using an img tag instead of an object tag. Arun Isaac
2021-06-01Do not export obsolete functions.•••* ccwl/ccwl.scm: Do not export step and pipeline. Arun Isaac
2021-06-01Introduce new command definition syntax.•••* ccwl/ccwl.scm: Do not export input and output. (<input>): Delete source field. Add position field. (input): Accept position and prefix fields in constructor. Do not initialize non-existent source field. (<command>): Delete additional-inputs field. Add inputs field. Delete set-command-outputs and set-command-stdin setters. (command): Rewrite as macro that accepts new command definition syntax. (<cli-element>): Delete type. (command->cwl): Generate CWL from new <command> type. (command-input-keys): Simplify to support new <command> type. Arun Isaac
2021-06-01Remove unused setters, appenders, etc.•••* ccwl/ccwl.scm: Do not export input-with-prefix. (<input>): Delete set-input-prefix. (<step>): Delete set-step-run, set-step-id, set-step-out. (input-with-prefix, field-appender, modify-step-run, append-step-in, append-step-out, append-command-outputs): Delete functions. Arun Isaac
2021-06-01In pipe, pass through input keys to all expressions.•••Earlier, the input keys would only be passed to the first expression. The second expression would only receive the output keys from the first expression. Passing input keys through to all expressions is a common use case, since expressions often need to access global inputs. If the original behavior is desired, we can always introduce a new construct, say `pipe-strict'. * ccwl/ccwl.scm (workflow-steps): In pipe, pass through input keys to all expressions. Arun Isaac
2021-06-01Filter out global workflow inputs from workflow outputs.•••* ccwl/ccwl.scm (key->output): New function. (workflow-steps): Filter out global workflow inputs from workflow-outputs. Arun Isaac
2021-06-01Add filter-mapi.•••* ccwl/utils.scm (filter-mapi): New public function. Arun Isaac
2021-06-01Add syntax-lambda**.•••* ccwl/utils.scm (syntax-lambda**): New public macro. Arun Isaac
2021-06-01Avoid datum->syntax.•••* ccwl/utils.scm (lambda**): Avoid using datum->syntax whenever possible. Arun Isaac
2021-06-01Add unsyntax-keywords.•••* ccwl/utils.scm (unsyntax-keywords): New function. Arun Isaac
2021-05-25Git ignore auto-generated doc files.•••* .gitignore: Add doc/*.html, doc/*.info, doc/.dirstamp and doc/stamp-vti. Arun Isaac
2021-05-25Add texinfo as a build dependency.•••* guix.scm: Import (gnu packages texinfo). Add texinfo to native-inputs. Arun Isaac
2021-05-25Add table of contents to manual.•••* doc/ccwl.texi: Add table of contents. Arun Isaac
2021-05-25Add title and copyright pages to manual.•••* doc/ccwl.texi: Add title and copyright pages. Arun Isaac
2021-05-25Hide Top node introduction in printed manual.•••* doc/ccwl.texi (Top): Move introduction into ifnottex block. Arun Isaac
2021-05-25Mention version in manual.•••* doc/ccwl.texi: Include version.texi. (Top): Mention version. Arun Isaac
2021-05-24Mention documentation in the README.•••* README.org (Documentation): New section. Arun Isaac
2021-05-24Rewrite the README introduction to ccwl.•••* README.org: Rewrite introduction. Arun Isaac
2021-05-24Add HTML manual to website.•••* Makefile.am (website/manual/dev/en): New target. (website): Require website/manual/dev/en. (AM_MAKEINFOHTMLFLAGS): Add --css-ref=/style.css to include CSS. Arun Isaac
2021-05-24Add CSS to website.•••* Makefile.am (website/style.css): New target. (website): Require website/style.css. * style.css: New file. Arun Isaac
2021-05-24Build website from README.org.•••* Makefile.am (website, website/index.html, clean-local): New targets. * build-aux/build-home-page.el: New file. Arun Isaac
2021-05-24Add Contributing section to README.•••* README.org (Contributing): New section. Arun Isaac
2021-05-24Downcase ccwl.•••* README.org: Downcase ccwl. Arun Isaac
2021-05-24Do not compile pre-inst-env.•••* pre-inst-env.in: Add --no-auto-compile flag to shebang. Arun Isaac
2021-05-24Remove unnecessary -s flag from shebang.•••* pre-inst-env.in, scripts/ccwl.in: Remove unnecessary -s flag from shebang. Arun Isaac
2021-05-24Replace suffix rule with pattern rule.•••Suffix rules are deprecated and should not be used. Pattern rules are clearer and more general. * Makefile.am: Replace suffix rule to build scheme files with pattern rule. Arun Isaac
2021-05-24Do not bind command line argument 0 in pre-inst-env.•••* pre-inst-env.in: Do not bind command line argument 0 to a variable. Arun Isaac
2021-05-24Set PATH in pre-inst-env.•••* pre-inst-env.in: Append scripts directory to PATH. Arun Isaac
2021-05-24Add "Workflow with multiple steps" to tutorial.•••* doc/ccwl.texi (Workflow with multiple steps): New node. (Tutorial): Link to "Workflow with multiple steps" node from menu. Arun Isaac
2021-05-24Install ccwl script.•••* Makefile.am (bin_SCRIPTS): Add scripts/ccwl. Arun Isaac
2021-05-24Add "Capturing output files" to tutorial.•••* doc/ccwl.texi (Capturing output files): New section. (Tutorial): Link to "Capturing output files" node from menu. Arun Isaac
2021-05-24Add "Capturing stdout" section to tutorial.•••* doc/ccwl.texi (Capturing the standard output stream of a command): New section. * doc/ccwl.texi (Tutorial): Link to "Capturing stdout" node from menu. Arun Isaac
2021-05-24Add "First example" section to tutorial.•••* doc/ccwl.texi (First example): New section. (Tutorial): Link to "First example" node from menu. Arun Isaac