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Diffstat (limited to 'doc')
| -rw-r--r-- | doc/ccwl.skb | 9 |
1 files changed, 9 insertions, 0 deletions
diff --git a/doc/ccwl.skb b/doc/ccwl.skb index 39116ee..69e5a38 100644 --- a/doc/ccwl.skb +++ b/doc/ccwl.skb @@ -323,6 +323,15 @@ misspelt words appear at the output.] (prog :line #f (source :file "doc/spell-check.out"))))) (chapter :title [Cookbook] + (section :title [Stage input files] + (p [When running command-line tools, CWL normally has separate +directories for input and output files. But, some command-line tools +expect their input and output files to be in the same directory, and +this may not sit well with them. In such situations, we can tell CWL +to ,(emph "stage") the input file into the output directory. We may +express this in ccwl using the ,(code "#:stage?") parameter to the +inputs to be staged. Here is a rather concocted example.] + (scheme-source "doc/staging-input-files.scm"))) (section :title [Reuse external CWL workflows] (p [Even though you may be a ccwl convert (hurrah!), others may not be. And, you might have to work with CWL workflows written by |