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author | Arun Isaac | 2021-06-22 08:35:37 +0530 |
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committer | Arun Isaac | 2021-06-22 08:35:37 +0530 |
commit | b78afadc51c4c5666114fab26db31e0199c1f50c (patch) | |
tree | 5b80bfae3ae93592fe722ec72f624da9211648ea /doc/ccwl.skb | |
parent | f99a10235c437899448f2a2cd112e5d9a7c16464 (diff) | |
download | ccwl-b78afadc51c4c5666114fab26db31e0199c1f50c.tar.gz ccwl-b78afadc51c4c5666114fab26db31e0199c1f50c.tar.lz ccwl-b78afadc51c4c5666114fab26db31e0199c1f50c.zip |
doc: Specify command inputs in a separate argument.
* doc/capture-output-file-with-parameter-reference.scm,
doc/capture-output-file.scm, doc/capture-stdout.scm, doc/checksum.scm,
doc/decompress-compile-run.scm, doc/hello-world.scm: Specify command
inputs in a separate argument.
* doc/ccwl.skb (Tutorial)[First example]: Update description of
command definition accordingly.
Diffstat (limited to 'doc/ccwl.skb')
-rw-r--r-- | doc/ccwl.skb | 16 |
1 files changed, 10 insertions, 6 deletions
diff --git a/doc/ccwl.skb b/doc/ccwl.skb index 57baa94..f31cba8 100644 --- a/doc/ccwl.skb +++ b/doc/ccwl.skb @@ -58,12 +58,16 @@ string.]) (p [The first form in this code defines the ,(code "print") command. This form is the equivalent of defining a -,(code "CommandLineTool") class workflow in CWL. All arguments after -,(code "#:run") specify the command that will be run. One of those -arguments ,(code "(input 'message #:type 'string)") refers to a -,(code "string") type input named ,(code "message"). Notice how the -command definition is very close to a shell command, only that it is -slightly annotated with inputs and their types.]) +,(code "CommandLineTool") class workflow in CWL. The arguments after +,(code "#:inputs") define the inputs to the workflow. The arguments +after ,(code "#:run") specify the command that will be run. The input +,(code "(message #:type 'string)") defines a ,(code "string") type +input named ,(code "message"). The command defined in the +,(code "#:run") argument is the command itself followed by a list of +command arguments. One of the arguments references the input +,(code "message"). Notice how the command definition is very close to +a shell command, only that it is slightly annotated with inputs and +their types.]) (p [The second form describes the actual workflow and is the equivalent of defining a ,(code "Workflow") class workflow in CWL. The |