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| author | Arun Isaac | 2021-11-05 12:10:06 +0530 |
|---|---|---|
| committer | Arun Isaac | 2021-11-05 16:20:27 +0530 |
| commit | 4bea0b85e1992a01dd36d32c8b2c68a497c6d001 (patch) | |
| tree | 94e81feea6d0ebe90e3b0069e188c9bf42c7c1d2 /doc/ccwl.skb | |
| parent | ef62659838c6b5c0e7245aa434e07b89e3a603b9 (diff) | |
| download | ccwl-4bea0b85e1992a01dd36d32c8b2c68a497c6d001.tar.gz ccwl-4bea0b85e1992a01dd36d32c8b2c68a497c6d001.tar.lz ccwl-4bea0b85e1992a01dd36d32c8b2c68a497c6d001.zip | |
doc: Document reuse of external CWL workflows.
* doc/ccwl.skb (Cookbook): New chapter.
* doc/external-cwl-workflow.scm, doc/echo.cwl: New files.
* .gitignore: Add !doc/echo.cwl.
Diffstat (limited to 'doc/ccwl.skb')
| -rw-r--r-- | doc/ccwl.skb | 16 |
1 files changed, 16 insertions, 0 deletions
diff --git a/doc/ccwl.skb b/doc/ccwl.skb index 57fa225..c460ab4 100644 --- a/doc/ccwl.skb +++ b/doc/ccwl.skb @@ -249,6 +249,22 @@ following output.]) ,(file "d2f19c786fcd3feb329004c8747803fba581a02d") and ,(file "0d2eaa5619c14b43326101200d0f27b0d8a1a4b1") respectively.])))) + (chapter :title [Cookbook] + (section :title [Reuse external CWL workflows] + (p [Even though you may be a ccwl convert (hurrah!), others may +not be. And, you might have to work with CWL workflows written by +others. ccwl permits easy reuse of external CWL workflows, and free +mixing with ccwl commands. Here is a workflow to find the string +length of a message, where one of the commands, ,(code "echo"), is +defined as an external CWL workflow. External CWL workflows are +referenced in ccwl using ,(code "cwl-workflow"). The identifiers and +types of the inputs/outputs are read from the YAML specification of +the external CWL workflow.] + (scheme-source "doc/external-cwl-workflow.scm") + [,(file "echo.cwl") is defined as] + ;; TODO: Syntax highlight doc/external-cwl-workflow.cwl. + (prog :line #f (source :file "doc/echo.cwl"))))) + (chapter :title [Contributing] (p [ccwl is developed on GitHub at ,(ref :url "https://github.com/arunisaac/ccwl"). Feedback, suggestions, |