From 92727365d1e3fc67b66278fd7cbcda77dd27c09e Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Mon, 4 Aug 2025 12:40:31 +0100
Subject: Add simple workflow.

* README.md (How to use): Indent down into "Joint/federated analysis
with many data owners" section.
[Simple data sharing]: New section.
* doc/generate-images.sh: Add simple workflow.
* doc/workflow.png: Rename to doc/joint-workflow.png.
* doc/workflow.uml: Rename to doc/joint-workflow.uml.
* doc/simple-workflow.png, doc/simple-workflow.uml: New files.
* tests/test_pyhegp.py: Import pytest.
(test_simple_workflow): New test.
* test-data/genotype.tsv: New file.
---
 doc/generate-images.sh  |   3 ++-
 doc/joint-workflow.png  | Bin 0 -> 27569 bytes
 doc/joint-workflow.uml  |  16 ++++++++++++++++
 doc/simple-workflow.png | Bin 0 -> 7260 bytes
 doc/simple-workflow.uml |   3 +++
 doc/workflow.png        | Bin 27569 -> 0 bytes
 doc/workflow.uml        |  16 ----------------
 7 files changed, 21 insertions(+), 17 deletions(-)
 create mode 100644 doc/joint-workflow.png
 create mode 100644 doc/joint-workflow.uml
 create mode 100644 doc/simple-workflow.png
 create mode 100644 doc/simple-workflow.uml
 delete mode 100644 doc/workflow.png
 delete mode 100644 doc/workflow.uml

(limited to 'doc')

diff --git a/doc/generate-images.sh b/doc/generate-images.sh
index e1ee0ba..0950519 100755
--- a/doc/generate-images.sh
+++ b/doc/generate-images.sh
@@ -1,3 +1,4 @@
 #! /bin/sh
 
-cat workflow.uml | guix shell plantuml -- plantuml -p > workflow.png
+cat simple-workflow.uml | guix shell plantuml -- plantuml -p > simple-workflow.png
+cat joint-workflow.uml | guix shell plantuml -- plantuml -p > joint-workflow.png
diff --git a/doc/joint-workflow.png b/doc/joint-workflow.png
new file mode 100644
index 0000000..b2ff1b2
Binary files /dev/null and b/doc/joint-workflow.png differ
diff --git a/doc/joint-workflow.uml b/doc/joint-workflow.uml
new file mode 100644
index 0000000..2d1542c
--- /dev/null
+++ b/doc/joint-workflow.uml
@@ -0,0 +1,16 @@
+actor "Data Broker" as broker
+actor "Data Owner 1" as owner1
+actor "Data Owner 2" as owner2
+actor "Data Owner 3" as owner3
+owner1 -> broker: Send summary statistics
+owner2 -> broker: Send summary statistics
+owner3 -> broker: Send summary statistics
+broker --> owner1: Send pooled statistics
+broker --> owner2: Send pooled statistics
+broker --> owner3: Send pooled statistics
+owner1 -> broker: Encrypt and share ciphertext
+owner2 -> broker: Encrypt and share ciphertext
+owner3 -> broker: Encrypt and share ciphertext
+broker -> owner1: Share concatenated ciphertext
+broker -> owner2: Share concatenated ciphertext
+broker -> owner3: Share concatenated ciphertext
diff --git a/doc/simple-workflow.png b/doc/simple-workflow.png
new file mode 100644
index 0000000..5d9f01d
Binary files /dev/null and b/doc/simple-workflow.png differ
diff --git a/doc/simple-workflow.uml b/doc/simple-workflow.uml
new file mode 100644
index 0000000..02dc005
--- /dev/null
+++ b/doc/simple-workflow.uml
@@ -0,0 +1,3 @@
+actor "Researcher" as researcher
+actor "Data Owner" as owner
+owner -> researcher: Encrypt and share ciphertext
\ No newline at end of file
diff --git a/doc/workflow.png b/doc/workflow.png
deleted file mode 100644
index b2ff1b2..0000000
Binary files a/doc/workflow.png and /dev/null differ
diff --git a/doc/workflow.uml b/doc/workflow.uml
deleted file mode 100644
index 2d1542c..0000000
--- a/doc/workflow.uml
+++ /dev/null
@@ -1,16 +0,0 @@
-actor "Data Broker" as broker
-actor "Data Owner 1" as owner1
-actor "Data Owner 2" as owner2
-actor "Data Owner 3" as owner3
-owner1 -> broker: Send summary statistics
-owner2 -> broker: Send summary statistics
-owner3 -> broker: Send summary statistics
-broker --> owner1: Send pooled statistics
-broker --> owner2: Send pooled statistics
-broker --> owner3: Send pooled statistics
-owner1 -> broker: Encrypt and share ciphertext
-owner2 -> broker: Encrypt and share ciphertext
-owner3 -> broker: Encrypt and share ciphertext
-broker -> owner1: Share concatenated ciphertext
-broker -> owner2: Share concatenated ciphertext
-broker -> owner3: Share concatenated ciphertext
-- 
cgit 1.4.1