From 079c09701a10324b265cc8f79642ebdb3293ecf9 Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Fri, 8 Aug 2025 15:19:28 +0100
Subject: Replace csv extension with tsv extension on genotype files.

---
 README.md | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/README.md b/README.md
index 728c206..a8aaa2a 100644
--- a/README.md
+++ b/README.md
@@ -64,7 +64,7 @@ They then send the encrypted data to the researcher. Note that data sharing is c
 
 Data owners generate summary statistics for their data.
 ```
-pyhegp summary genotype.csv -o summary
+pyhegp summary genotype.tsv -o summary
 ```
 They share this with the data broker who pools it to compute the summary statistics of the complete dataset.
 ```
@@ -72,11 +72,11 @@ pyhegp pool -o complete-summary summary1 summary2 ...
 ```
 The data broker shares these summary statistics with the data owners. The data owners standardize their data using these summary statistics, and encrypt their data using a random key.
 ```
-pyhegp encrypt -s complete-summary -o encrypted-genotype.csv genotype.csv
+pyhegp encrypt -s complete-summary -o encrypted-genotype.tsv genotype.tsv
 ```
 Finally, the data owners share the encrypted data with the broker who concatenates it and shares it with all parties.
 ```
-pyhegp cat -o complete-encrypted-genotype.csv encrypted-genotype1.csv encrypted-genotype2.csv ...
+pyhegp cat -o complete-encrypted-genotype.tsv encrypted-genotype1.tsv encrypted-genotype2.tsv ...
 ```
 Note that all data sharing is carried out-of-band and is outside the scope of `pyhegp`.
 
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