From 530652ab438a977c500df896d30b163c511dfc4a Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Thu, 13 Nov 2025 02:20:27 +0000
Subject: Parameterize query when checking for the QTL.

This will allow generalization to JWAS later.
---
 .guix/hsmice-test.scm | 3 ++-
 1 file changed, 2 insertions(+), 1 deletion(-)

(limited to '.guix/hsmice-test.scm')

diff --git a/.guix/hsmice-test.scm b/.guix/hsmice-test.scm
index 1982f65..3f6f7c5 100644
--- a/.guix/hsmice-test.scm
+++ b/.guix/hsmice-test.scm
@@ -186,7 +186,8 @@ genome-wide association study} library for R.")
           (for-each (cut invoke
                          "python3"
                          #$(local-file "../e2e-tests/hsmice/check-qtl.py")
-                         <>)
+                         <>
+			 "p < 1e-10")
                     (find-files #$hsmice-r-mixed-model-gwas
                                 "\\-pvalues$"))))))
 
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cgit 1.4.1