From b0277ae1da434d81a744a87f4152e6d7852ee4ed Mon Sep 17 00:00:00 2001 From: Arun Isaac Date: Wed, 26 Aug 2026 02:50:29 +0100 Subject: Do not traverse graph when extracting segments in path range. --- test-data/expected-output/test1-extract-path-7-10.gfa | 8 ++++++++ test-data/expected-output/test1-extract-path-7-8.gfa | 4 ++++ test-data/expected-output/test1-extract-path-7-9.gfa | 6 ++++++ test-data/expected-output/test1-extract-path-8-10.gfa | 5 +++++ test-data/expected-output/test1-extract-path-8-9.gfa | 3 +++ 5 files changed, 26 insertions(+) create mode 100644 test-data/expected-output/test1-extract-path-7-10.gfa create mode 100644 test-data/expected-output/test1-extract-path-7-8.gfa create mode 100644 test-data/expected-output/test1-extract-path-7-9.gfa create mode 100644 test-data/expected-output/test1-extract-path-8-10.gfa create mode 100644 test-data/expected-output/test1-extract-path-8-9.gfa (limited to 'test-data/expected-output') diff --git a/test-data/expected-output/test1-extract-path-7-10.gfa b/test-data/expected-output/test1-extract-path-7-10.gfa new file mode 100644 index 0000000..327c140 --- /dev/null +++ b/test-data/expected-output/test1-extract-path-7-10.gfa @@ -0,0 +1,8 @@ +H VN:Z:1.0 +S 1 CAAATAAG +L 1 + 3 + 0M +S 3 G +L 3 + 5 + 0M +S 5 C +P x 1+,3+,5+ * +P y 1+ * diff --git a/test-data/expected-output/test1-extract-path-7-8.gfa b/test-data/expected-output/test1-extract-path-7-8.gfa new file mode 100644 index 0000000..6ac10e2 --- /dev/null +++ b/test-data/expected-output/test1-extract-path-7-8.gfa @@ -0,0 +1,4 @@ +H VN:Z:1.0 +S 1 CAAATAAG +P x 1+ * +P y 1+ * diff --git a/test-data/expected-output/test1-extract-path-7-9.gfa b/test-data/expected-output/test1-extract-path-7-9.gfa new file mode 100644 index 0000000..d013efd --- /dev/null +++ b/test-data/expected-output/test1-extract-path-7-9.gfa @@ -0,0 +1,6 @@ +H VN:Z:1.0 +S 1 CAAATAAG +L 1 + 3 + 0M +S 3 G +P x 1+,3+ * +P y 1+ * diff --git a/test-data/expected-output/test1-extract-path-8-10.gfa b/test-data/expected-output/test1-extract-path-8-10.gfa new file mode 100644 index 0000000..703d856 --- /dev/null +++ b/test-data/expected-output/test1-extract-path-8-10.gfa @@ -0,0 +1,5 @@ +H VN:Z:1.0 +S 3 G +L 3 + 5 + 0M +S 5 C +P x 3+,5+ * diff --git a/test-data/expected-output/test1-extract-path-8-9.gfa b/test-data/expected-output/test1-extract-path-8-9.gfa new file mode 100644 index 0000000..243a879 --- /dev/null +++ b/test-data/expected-output/test1-extract-path-8-9.gfa @@ -0,0 +1,3 @@ +H VN:Z:1.0 +S 3 G +P x 3+ * -- cgit 1.4.1