From 1783136fa37cb502d07ce2e4bb0474cd3a0ff1f2 Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Fri, 28 Aug 2026 00:46:37 +0100
Subject: Split subpaths selected by extract path range into discrete
 fragments.

When `domagi extract` is given a path range, it may select
discontinuous fragments of other paths. These fragments must be output
as separate paths, not erroneously merged together.
---
 test-data/expected-output/test1-extract-path-no-bridge-10-20.gfa | 9 +++++++++
 1 file changed, 9 insertions(+)
 create mode 100644 test-data/expected-output/test1-extract-path-no-bridge-10-20.gfa

(limited to 'test-data/expected-output/test1-extract-path-no-bridge-10-20.gfa')

diff --git a/test-data/expected-output/test1-extract-path-no-bridge-10-20.gfa b/test-data/expected-output/test1-extract-path-no-bridge-10-20.gfa
new file mode 100644
index 0000000..4846f99
--- /dev/null
+++ b/test-data/expected-output/test1-extract-path-no-bridge-10-20.gfa
@@ -0,0 +1,9 @@
+H	VN:Z:1.0
+S	6	TTG
+L	6	+	8	+	0M
+S	8	G
+L	8	+	9	+	0M
+S	9	AAATTTTCTGGAGTTCTAT
+P	x:10-33	6+,8+,9+	*
+P	y:10-13	6+	*
+P	y:14-33	9+	*
-- 
cgit 1.4.1