cwlVersion: v1.1 class: CommandLineTool inputs: readsFA: File script: type: File default: {class: File, location: relabel-seqs.py} outputs: spoaGFA: type: stdout requirements: InlineJavascriptRequirement: {} ShellCommandRequirement: {} hints: DockerRequirement: dockerPull: "quay.io/biocontainers/spoa:3.0.2--hc9558a2_0" ResourceRequirement: coresMin: 1 ramMin: $(15 * 1024) outdirMin: $(Math.ceil(inputs.readsFA.size/(1024*1024*1024) + 20)) baseCommand: spoa stdout: $(inputs.readsFA.nameroot).g6.gfa arguments: [ $(inputs.readsFA), -G, -g, '-6' ]