<!DOCTYPE html> <html> {% include 'header.html' %} <body> {% include 'banner.html' %} {% include 'menu.html' %} <h1>BLOG Entries</h1> <i>Note that this is work in progress (WIP)</i> <section class="blog-entries"> <div class="blog-table"> <div class="blog-table-body"> <div class="blog-table-row"> <div class="blog-table-cell"> <a href="https://github.com/arvados/bh20-seq-resource/blob/master/doc/blog/using-covid-19-pubseq-part1.org">Query metadata with SPARQL</a> </div> <div class="blog-table-cell"> We fetch sequence data and metadata. We query the metadata in multiple ways using SPARQL and onthologies </div> </div> <div class="blog-table-row"> <div class="blog-table-cell"> <a href="https://github.com/arvados/bh20-seq-resource/blob/master/doc/blog/using-covid-19-pubseq-part2.org">Interacting with Arvados</a> </div> <div class="blog-table-cell"> We explore the Arvados command line and API </div> </div> <div class="blog-table-row"> <div class="blog-table-cell"> <a href="https://github.com/arvados/bh20-seq-resource/blob/master/doc/blog/using-covid-19-pubseq-part3.org">Submitting a sequence</a> </div> <div class="blog-table-cell"> We submit a sequence to the database </div> </div> <div class="blog-table-row"> <div class="blog-table-cell"> <a href="https://github.com/arvados/bh20-seq-resource/blob/master/doc/blog/using-covid-19-pubseq-part4.org">Update workflow</a> </div> <div class="blog-table-cell"> We modify a workflow to get new output </div> </div> <div class="blog-table-row"> <div class="blog-table-cell"> <a href="https://github.com/arvados/bh20-seq-resource/blob/master/doc/blog/using-covid-19-pubseq-part5.org">Update metadata</a> </div> <div class="blog-table-cell"> We modify metadata for all to use! </div> </div> </div> </div> </section> {% include 'footer.html' %} <script type="text/javascript"> let scriptRoot = {{ request.script_root|tojson|safe }}; // examples document.addEventListener("DOMContentLoaded", function(){ var count = fetch("/api/getCount") .then((resp) => resp.json()) .then(function (data) { count = data["sequences"]; console.log(count); span = document.getElementById("Counter"); txt = document.createTextNode(count); span.appendChild(txt); }); }); </script> </body> </html>