From ce696b41b3476891ecb05185d64c289b140a73af Mon Sep 17 00:00:00 2001
From: Peter Amstutz
Date: Tue, 21 Apr 2020 17:09:16 -0400
Subject: Increase ram requirement for minimap2

Add --kickoff to immediately start an analysis workflow.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
---
 workflows/pangenome-generate/minimap2.cwl | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'workflows')

diff --git a/workflows/pangenome-generate/minimap2.cwl b/workflows/pangenome-generate/minimap2.cwl
index bf19ef7..42d1dce 100644
--- a/workflows/pangenome-generate/minimap2.cwl
+++ b/workflows/pangenome-generate/minimap2.cwl
@@ -12,7 +12,7 @@ hints:
   ResourceRequirement:
     coresMin: 8
     coresMax: 32
-    ramMin: $(7 * 1024)
+    ramMin: $(9 * 1024)
     outdirMin: $(Math.ceil(inputs.readsFA.size/(1024*1024*1024) + 20))
 stdout: $(inputs.readsFA.nameroot).paf
 baseCommand: minimap2
-- 
cgit v1.2.3