From 63b75e9cf095737fa8d700d1fd1e4d90e17999f5 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Thu, 31 Dec 2020 10:21:58 +0000 Subject: genbank: header --- workflows/pull-data/genbank/transform_genbank2yamlfa.py | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) mode change 100644 => 100755 workflows/pull-data/genbank/transform_genbank2yamlfa.py (limited to 'workflows/pull-data/genbank') diff --git a/workflows/pull-data/genbank/transform_genbank2yamlfa.py b/workflows/pull-data/genbank/transform_genbank2yamlfa.py old mode 100644 new mode 100755 index 025b4d9..8b970b6 --- a/workflows/pull-data/genbank/transform_genbank2yamlfa.py +++ b/workflows/pull-data/genbank/transform_genbank2yamlfa.py @@ -1,9 +1,12 @@ +#!/usr/bin/env python3 +# +# Create a single YAML/FASTA from genbank XML + # ---------------------------------------------------------------------- """ Generate metadata (YAML) and FASTA files for each accession """ - if not os.path.exists(dir_fasta_and_yaml): os.makedirs(dir_fasta_and_yaml) -- cgit v1.2.3