From ee01616a8c5ab5449325599dfaea32341f049784 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Fri, 1 Jan 2021 15:43:47 +0000
Subject: update-from-genbank.py

---
 workflows/pull-data/genbank/README.md | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'workflows/pull-data/genbank/README.md')

diff --git a/workflows/pull-data/genbank/README.md b/workflows/pull-data/genbank/README.md
index d7c294b..479ddc9 100644
--- a/workflows/pull-data/genbank/README.md
+++ b/workflows/pull-data/genbank/README.md
@@ -6,7 +6,7 @@ sparql-fetch-ids > pubseq_ids.txt
 # --- get list of missing genbank IDs
 genbank-fetch-ids.py --skip pubseq_ids.txt > genbank_ids.txt
 # --- fetch XML
-update-from-genbank.py --ids genbank_ids.txt --outdir ~/tmp/genbank
+update-from-genbank.py --ids genbank_ids.txt --out ~/tmp/genbank
 # --- Transform to YAML and FASTA
 transform-genbank-xml2yamlfa --dir ~/tmp/genbank id --outdir ~/tmp/pubseq
 ```
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