From 9d75ce088e6388bf23ae077fd06b2a3f51be1bda Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Tue, 5 Jan 2021 09:34:26 +0000
Subject: API: fix returned record to include original metadata

---
 workflows/pull-data/genbank/README.md | 12 ++++++++++--
 1 file changed, 10 insertions(+), 2 deletions(-)

(limited to 'workflows/pull-data/genbank/README.md')

diff --git a/workflows/pull-data/genbank/README.md b/workflows/pull-data/genbank/README.md
index 5464d1d..188ff6f 100644
--- a/workflows/pull-data/genbank/README.md
+++ b/workflows/pull-data/genbank/README.md
@@ -11,7 +11,8 @@ The following workflow sends GenBank data into PubSeq
 
 ```sh
 # --- get list of IDs already in PubSeq
-../../tools/sparql-fetch-ids > pubseq_ids.txt
+../../tools/pubseq-fetch-ids > pubseq_ids.txt
+
 # --- get list of missing genbank IDs
 python3 genbank-fetch-ids.py --skip pubseq_ids.txt > genbank_ids.txt
 
@@ -26,6 +27,13 @@ python3 ../../workflows/tools/normalize-yamlfa.py -s ~/tmp/yamlfa/state.json --s
 
 ```
 
+## Validate GenBank data
+
+To pull the data from PubSeq use the list of pubseq ids generated
+above.
+
+
+
 # TODO
 
-- [ ] Add id for GenBank accession - i.e. how can we tell a record is from GenBank
+- [X] Add id for GenBank accession - i.e. how can we tell a record is from GenBank
-- 
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