From fd4b04479fb85f01d2cb2e582e9e470296b8b3cf Mon Sep 17 00:00:00 2001 From: Peter Amstutz Date: Wed, 18 Nov 2020 21:24:52 -0500 Subject: Give from_sparql more keep cache. Arvados-DCO-1.1-Signed-off-by: Peter Amstutz --- workflows/pangenome-generate/from_sparql.cwl | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) (limited to 'workflows/pangenome-generate') diff --git a/workflows/pangenome-generate/from_sparql.cwl b/workflows/pangenome-generate/from_sparql.cwl index ab85656..380b59c 100644 --- a/workflows/pangenome-generate/from_sparql.cwl +++ b/workflows/pangenome-generate/from_sparql.cwl @@ -1,5 +1,7 @@ cwlVersion: v1.1 class: CommandLineTool +$namespaces: + arv: "http://arvados.org/cwl#" requirements: DockerRequirement: dockerFile: | @@ -7,7 +9,10 @@ requirements: RUN apt-get update && apt-get -yq --no-install-recommends install samtools python3-rdflib dockerImageId: rdflib-and-samtools ResourceRequirement: - ramMin: 1024 + ramMin: 768 + arv:RuntimeConstraints: + keep_cache: 2048 + outputDirType: keep_output_dir inputs: script: type: File -- cgit v1.2.3