From 9ddcfeacb3191638f42b08af999889d867f0f81c Mon Sep 17 00:00:00 2001
From: Peter Amstutz
Date: Mon, 20 Apr 2020 14:57:25 -0400
Subject: Better handling of duplicate sequences

Also save original fasta label in metadata
---
 workflows/pangenome-generate/testjob.yml | 16 ++++++++++++++++
 1 file changed, 16 insertions(+)
 create mode 100644 workflows/pangenome-generate/testjob.yml

(limited to 'workflows/pangenome-generate/testjob.yml')

diff --git a/workflows/pangenome-generate/testjob.yml b/workflows/pangenome-generate/testjob.yml
new file mode 100644
index 0000000..a48aff8
--- /dev/null
+++ b/workflows/pangenome-generate/testjob.yml
@@ -0,0 +1,16 @@
+inputReads:
+  - class: File
+    location: ../../example/sequence.fasta
+  - class: File
+    location: ../../example/sequence.fasta
+metadata:
+  - class: File
+    location: ../../example/metadata.yaml
+  - class: File
+    location: ../../example/metadata.yaml
+metadataSchema:
+  class: File
+  location: ../../bh20sequploader/bh20seq-schema.yml
+subjects:
+  - http://arvados.org/keep/seq1
+  - http://arvados.org/keep/seq2
-- 
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