From 6599feb6a6f8b488bd2d12fcf532c3b8a917a17f Mon Sep 17 00:00:00 2001
From: Michael R. Crusoe
Date: Tue, 5 May 2020 13:11:02 +0200
Subject: move some tools into the shared repo

---
 workflows/pangenome-generate/odgi_to_rdf.cwl | 9 +++------
 1 file changed, 3 insertions(+), 6 deletions(-)

(limited to 'workflows/pangenome-generate/odgi_to_rdf.cwl')

diff --git a/workflows/pangenome-generate/odgi_to_rdf.cwl b/workflows/pangenome-generate/odgi_to_rdf.cwl
index 31ef0c5..96579a3 100644
--- a/workflows/pangenome-generate/odgi_to_rdf.cwl
+++ b/workflows/pangenome-generate/odgi_to_rdf.cwl
@@ -10,10 +10,8 @@ requirements:
   ResourceRequirement:
     ramMin: $((2 * 1024) + 1)
 inputs:
-  - id: odgi
-    type: File
-  - id: output_name
-    type: string?
+  odgi: File
+  output_name: string?
 
 stdout: $(inputs.output_name || inputs.odgi.nameroot+'.ttl.xz')
 
@@ -23,5 +21,4 @@ arguments:
    xz, --stdout]
 
 outputs:
-  - id: rdf
-    type: stdout
+  rdf: stdout
-- 
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