From 535b8017ddd27a9db683f6d29368258b5c48cf5a Mon Sep 17 00:00:00 2001
From: Peter Amstutz
Date: Fri, 3 Jul 2020 20:45:17 +0000
Subject: Improving genbank import workflow

---
 scripts/import_to_arvados.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'scripts/import_to_arvados.py')

diff --git a/scripts/import_to_arvados.py b/scripts/import_to_arvados.py
index 78cd13d..aca72d6 100644
--- a/scripts/import_to_arvados.py
+++ b/scripts/import_to_arvados.py
@@ -11,4 +11,4 @@ os.chdir("fasta_and_yaml")
 fasta_files = glob.glob("*.fasta")
 
 for f in fasta_files:
-    subprocess.run(["bh20-seq-uploader", f, "%s.yaml" %f[:-6]])
+    subprocess.run(["bh20-seq-uploader", "%s.yaml" %f[:-6], f])
-- 
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