From 4a7f822a502ca213d405c93cea9b330b3d32ba20 Mon Sep 17 00:00:00 2001
From: Andrea Guarracino
Date: Sat, 18 Apr 2020 22:18:11 +0200
Subject: ncbi_speciesman_source mapping

---
 .../ncbi_speciesman_source.csv                     | 22 ++++++++++++++++++++++
 1 file changed, 22 insertions(+)
 create mode 100644 scripts/dict_ontology_standardization/ncbi_speciesman_source.csv

(limited to 'scripts/dict_ontology_standardization')

diff --git a/scripts/dict_ontology_standardization/ncbi_speciesman_source.csv b/scripts/dict_ontology_standardization/ncbi_speciesman_source.csv
new file mode 100644
index 0000000..fcd6c94
--- /dev/null
+++ b/scripts/dict_ontology_standardization/ncbi_speciesman_source.csv
@@ -0,0 +1,22 @@
+nasopharyngeal swab, http://purl.obolibrary.org/obo/NCIT_C155831
+nasopharyngeal exudate,http://purl.obolibrary.org/obo/NCIT_C155831
+respiratory swab,http://purl.obolibrary.org/obo/NCIT_C155831
+naso-pharyngeal exudate,http://purl.obolibrary.org/obo/NCIT_C155831
+nasopharyngeal aspirate,http://purl.obolibrary.org/obo/NCIT_C155831
+nasal swab specimen,http://purl.obolibrary.org/obo/NCIT_C155831
+pharyngeal swab,http://purl.obolibrary.org/obo/NCIT_C155831
+respiratory secretion,http://purl.obolibrary.org/obo/NCIT_C155831
+mid-nasal swab,http://purl.obolibrary.org/obo/NCIT_C155831
+nasopharyngeal (throat) washings,http://purl.obolibrary.org/obo/NCIT_C155831
+oropharyngeal swab,http://purl.obolibrary.org/obo/NCIT_C155835
+throat swab,http://purl.obolibrary.org/obo/NCIT_C155835
+oro-pharyngeal,http://purl.obolibrary.org/obo/NCIT_C155835
+buccal swab,http://purl.obolibrary.org/obo/NCIT_C155835
+throat washing,http://purl.obolibrary.org/obo/NCIT_C155835
+Throat Swab,http://purl.obolibrary.org/obo/NCIT_C155835
+throat (oropharyngeal) swab,http://purl.obolibrary.org/obo/NCIT_C155835
+bronchoalveolar lavage fluid,http://purl.obolibrary.org/obo/NCIT_C13195
+swab,http://purl.obolibrary.org/obo/NCIT_C13195
+oral swab,http://purl.obolibrary.org/obo/NCIT_C13195
+bronchoalveolar lavage,http://purl.obolibrary.org/obo/NCIT_C13195
+sputum,http://purl.obolibrary.org/obo/NCIT_C13278
-- 
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