From d7498093d0f5e0db052ef88815d57c2648d09425 Mon Sep 17 00:00:00 2001
From: lltommy
Date: Thu, 9 Apr 2020 14:34:54 +0200
Subject: Updating schema and examples. This is still work in progress but we
 get there

---
 example/metadata.yaml | 49 +++++++++++++++++++++++++++++++++++--------------
 1 file changed, 35 insertions(+), 14 deletions(-)

(limited to 'example/metadata.yaml')

diff --git a/example/metadata.yaml b/example/metadata.yaml
index 587d0be..8a93379 100644
--- a/example/metadata.yaml
+++ b/example/metadata.yaml
@@ -1,17 +1,38 @@
-sampleInformation:
-  location: "USA"
-  host : "Homo Sapiens"
-  sequenceTechnology: "Sanger"
-  assemblyMethod: "CLC Genomics"
+host:
+    host_id: XX1
+    host_species: string
+    host_common_name: string
+    host_sex: string
+    host_age: 20
+    host_age_unit: string
+    host_health_status: string
+    host_treatment: string
+    additional_host_information: string
 
-InstituteInformation:
-  OriginatingLab: "Erik's kitchen"
-  SubmittingLab: "National Institute for Viral Disease Control and Prevention, China CDC"
+sample:
+    collector_name: XXX
+    collecting_institution: XXX
+    specimen_source: XXX
+    collection_date: XXX
+    collection_location: XXX
+    sample_storage_conditions: XXX
+    additional_collection_information: XXX
 
-SubmitterInformation:
-  Submitter: "National Institute for Viral Disease Control and Prevention, China CDC"
-  submissionDate: "04-04-2020"
+virus:
+    virus_species: XX
+    virus_strain: XX
 
-VirusDetail:
-  VirusName: "hCoV-19/USA/identifer/2020"
-  AccessionId: "EPI_ISL_Random"
+technology:
+    sample_sequencing_technology: XX
+    sequence_assembly_method: XX
+    sequencing_coverage: 70x
+
+submitter:
+    submitter_name: tester
+    submitter_address: testerAdd
+    originating_lab: testLab
+    lab_address: labAdd
+    provider_sample_id: string
+    submitter_sample_id: string
+    authors: testAuthor
+    submitter_id: X12
\ No newline at end of file
-- 
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