From 87440554e57d5c5ed846e98a3b3ec428330e15e8 Mon Sep 17 00:00:00 2001
From: AndreaGuarracino
Date: Thu, 12 Nov 2020 18:35:00 +0100
Subject: updated alignment_protocol field in the script, doc, and the example
 templates

---
 doc/blog/using-covid-19-pubseq-part3.html | 2 +-
 doc/blog/using-covid-19-pubseq-part3.org  | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

(limited to 'doc')

diff --git a/doc/blog/using-covid-19-pubseq-part3.html b/doc/blog/using-covid-19-pubseq-part3.html
index b49830b..aea74ad 100644
--- a/doc/blog/using-covid-19-pubseq-part3.html
+++ b/doc/blog/using-covid-19-pubseq-part3.html
@@ -589,7 +589,7 @@ virus:
 
 technology:
     sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_<span style="color: #8bc34a;">0009173</span>,http://www.ebi.ac.uk/efo/EFO_<span style="color: #8bc34a;">0009173</span>]
-    sequence_assembly_method: Protocol used for assembly
+    alignment_protocol: Protocol used for assembly
     sequencing_coverage: [<span style="color: #8bc34a;">70.0</span>, <span style="color: #8bc34a;">100.0</span>]
     additional_technology_information: Optional free text field for additional information
 
diff --git a/doc/blog/using-covid-19-pubseq-part3.org b/doc/blog/using-covid-19-pubseq-part3.org
index d0d6c7f..c98bf27 100644
--- a/doc/blog/using-covid-19-pubseq-part3.org
+++ b/doc/blog/using-covid-19-pubseq-part3.org
@@ -234,7 +234,7 @@ a more elaborate example (note most fields are optional) may look like
 
   technology:
       sample_sequencing_technology: [http://www.ebi.ac.uk/efo/EFO_0009173,http://www.ebi.ac.uk/efo/EFO_0009173]
-      sequence_assembly_method: Protocol used for assembly
+      alignment_protocol: Protocol used for assembly
       sequencing_coverage: [70.0, 100.0]
       additional_technology_information: Optional free text field for additional information
 
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