From dceac420dffa3aa74ef49a50d9be01e450e9d339 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Tue, 21 Jul 2020 11:05:00 +0100
Subject: Add sequencer JSON/XML output

---
 bh20simplewebuploader/templates/ebi-sample.xml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

(limited to 'bh20simplewebuploader/templates/ebi-sample.xml')

diff --git a/bh20simplewebuploader/templates/ebi-sample.xml b/bh20simplewebuploader/templates/ebi-sample.xml
index 441e29e..0b6b39e 100644
--- a/bh20simplewebuploader/templates/ebi-sample.xml
+++ b/bh20simplewebuploader/templates/ebi-sample.xml
@@ -1,6 +1,6 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <SAMPLE_SET>
-  <SAMPLE alias="{{ id }}" center_name="COVID-19 PubSeq">
+  <SAMPLE alias="{{ sampleid }}" center_name="COVID-19 PubSeq">
     <TITLE>COVID-19 PubSeq Sample</TITLE>
     <SAMPLE_NAME>
       <TAXON_ID>2697049</TAXON_ID>
@@ -14,7 +14,7 @@
       </SAMPLE_ATTRIBUTE>
       <SAMPLE_ATTRIBUTE>
         <TAG>sequencing method</TAG>
-        <VALUE>{{ sequence_method }}</VALUE>
+        <VALUE>{{ sequencer }}</VALUE>
       </SAMPLE_ATTRIBUTE>
       <SAMPLE_ATTRIBUTE>
         <TAG>collection date</TAG>
-- 
cgit v1.2.3