From 8f1819dc9b7ace9727d396d6b89f79b3b41165f8 Mon Sep 17 00:00:00 2001
From: AndreaGuarracino
Date: Fri, 28 Aug 2020 11:20:22 +0200
Subject: local QC is optional

---
 bh20sequploader/main.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to 'bh20sequploader')

diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py
index d2a6c5f..314a2ea 100644
--- a/bh20sequploader/main.py
+++ b/bh20sequploader/main.py
@@ -50,7 +50,7 @@ def qc_stuff(metadata, sequence_p1, sequence_p2, do_qc=True):
             target[0] = ("reads_1."+target[0][0][6:], target[0][1])
             target[1] = ("reads_2."+target[1][0][6:], target[0][1])
 
-        if target[0][2] == 'text/fasta' and sample_id != target[0][1]:
+        if do_qc and target[0][2] == 'text/fasta' and sample_id != target[0][1]:
             raise ValueError("The sample_id field in the metadata must be the same as the FASTA header")
 
     except Exception as e:
-- 
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