From 22f997f59da74c842b6be2a8f4f53e5aa116472e Mon Sep 17 00:00:00 2001 From: AndreaGuarracino Date: Fri, 28 Aug 2020 10:37:28 +0200 Subject: fixed local QC, modifying the regex for FASTA/FASTQ to be more general --- bh20sequploader/validation/formats | 4 ++-- bh20sequploader/validation/formats.mgc | Bin 1032 -> 1021 bytes 2 files changed, 2 insertions(+), 2 deletions(-) (limited to 'bh20sequploader') diff --git a/bh20sequploader/validation/formats b/bh20sequploader/validation/formats index ac804cf..0f61dc4 100644 --- a/bh20sequploader/validation/formats +++ b/bh20sequploader/validation/formats @@ -1,4 +1,4 @@ -0 regex \^\>.+\r?\n([acgtnACGTN]+\r?\n)*[acgtnACGTN]+(\r?\n)?$ FASTA +0 regex \^\>.+\r?\n([A-Za-z]+\r?\n)*[A-Za-z]+(\r?\n)?$ FASTA !:mime text/fasta -0 regex \^@.+\r?\n[acgtnACGTN]*\n\\+.*\n[!-i]*(\r\n)? FASTQ +0 regex \^@.+\r?\n[A-Za-z]*\n\\+.*\n[!-i]*(\r\n)? FASTQ !:mime text/fastq \ No newline at end of file diff --git a/bh20sequploader/validation/formats.mgc b/bh20sequploader/validation/formats.mgc index bff282a..ee9748c 100644 Binary files a/bh20sequploader/validation/formats.mgc and b/bh20sequploader/validation/formats.mgc differ -- cgit v1.2.3