From 1219eaf496c899f3043b90e30eb956f0f363bfb3 Mon Sep 17 00:00:00 2001
From: Peter Amstutz
Date: Mon, 20 Apr 2020 12:50:03 -0400
Subject: Add ShEx validation

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
---
 bh20sequploader/validation_shape.rdf | 59 ------------------------------------
 1 file changed, 59 deletions(-)
 delete mode 100644 bh20sequploader/validation_shape.rdf

(limited to 'bh20sequploader/validation_shape.rdf')

diff --git a/bh20sequploader/validation_shape.rdf b/bh20sequploader/validation_shape.rdf
deleted file mode 100644
index dd34fa9..0000000
--- a/bh20sequploader/validation_shape.rdf
+++ /dev/null
@@ -1,59 +0,0 @@
-PREFIX : <http://whatever/>
-PREFIX MainSchema: <http://biohackathon.org/bh20-seq-schema#MainSchema/>
-PREFIX hostSchema: <http://biohackathon.org/bh20-seq-schema#hostSchema/>
-PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
-PREFIX obo: <http://purl.obolibrary.org/obo/>
-PREFIX sio: <http://semanticscience.org/resource/>
-PREFIX efo: <http://www.ebi.ac.uk/efo/>
-PREFIX evs: <http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#>
-PREFIX edam: <http://edamontology.org/>
-
-:submissionShape {
-  MainSchema:host   @:hostShape ;
-  MainSchema:sample @:sampleShape ;
-  MainSchema:submitter @:submitterShape ;
-  MainSchema:technology @:technologyShape ;
-  MainSchema:virus @:virusShape;
-}
-
-:hostShape  {
-  	efo:EFO_0000532 [ obo:NCBITaxon_~ ] ;
-    obo:PATO_0000047 [ obo:NCIT_C20197  obo:NCIT_C27993  obo:NCIT_C17998 ] ;
-    sio:SIO_000115 xsd:string ;
-    obo:PATO_0000011 xsd:integer ?;
-    obo:NCIT_C42574 [ obo:UO_~ ] ?;
-    sio:SIO_001167 xsd:string ?;
-    efo:EFO_0000727 xsd:string ?;
-}
-
-:sampleShape  {
-    obo:OBI_0001895 xsd:string ;
-    sio:SIO_000115 xsd:string ;
-    sio:SIO_001167 xsd:string ;
-	evs:C25164 xsd:string ?;
-    obo:GAZ_00000448 [obo:GAZ_~] ?;
-    obo:OBI_0001472 xsd:string ?;
-    obo:OBI_0001479 xsd:string ?;
-}
-
-:submitterShape {
-    sio:SIO_000116 xsd:string ;
-	obo:NCIT_C37984 xsd:string ;
-	obo:NCIT_C37900 xsd:string ?;
-    obo:NCIT_C42781 xsd:string ?;
-    obo:OBI_0600047 xsd:string ?;
-    sio:SIO_000115 /https:\u002F\u002Forcid.org\u002F.{4}-.{4}-.{4}-.{4}/?;
-    sio:SIO_000172 xsd:string ?;
-    efo:EFO_0001741 xsd:string ?;
-}
-
-:technologyShape {
-    obo:OBI_0600047 xsd:string ;
-    obo:FLU_0000848 xsd:integer ?;
-    efo:EFO_0002699 xsd:string ?;
-}
-
-:virusShape{
-	edam:data_1875 [ obo:NCBITaxon_~ ] ;
-  	sio:SIO_010055 xsd:string ?;
-}
\ No newline at end of file
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