From 47666ab547da0c2fbdc2026f955d7d7b615d11fb Mon Sep 17 00:00:00 2001
From: lltommy
Date: Sun, 19 Apr 2020 19:47:39 +0200
Subject: Updating NCBI dictonaries, adding UI options, small yaml schema
 changes

---
 bh20sequploader/supporting_webuploader.yml | 48 ------------------------------
 1 file changed, 48 deletions(-)
 delete mode 100644 bh20sequploader/supporting_webuploader.yml

(limited to 'bh20sequploader/supporting_webuploader.yml')

diff --git a/bh20sequploader/supporting_webuploader.yml b/bh20sequploader/supporting_webuploader.yml
deleted file mode 100644
index 3650526..0000000
--- a/bh20sequploader/supporting_webuploader.yml
+++ /dev/null
@@ -1,48 +0,0 @@
-host_age_unit:
-  year: http://purl.obolibrary.org/obo/UO_0000036
-  month: http://purl.obolibrary.org/obo/UO_0000035
-  week: http://purl.obolibrary.org/obo/UO_0000035
-  day: http://purl.obolibrary.org/obo/UO_0000034
-  hour: http://purl.obolibrary.org/obo/UO_0000032
-
-host_sex:
-  Male: http://purl.obolibrary.org/obo/NCIT_C20197
-  Female: http://purl.obolibrary.org/obo/NCIT_C27993
-  unknown: http://purl.obolibrary.org/obo/NCIT_C17998
-
-sample_sequencing_technology:
-  Illumina NextSeq 500: http://www.ebi.ac.uk/efo/EFO_0009173
-  Oxford Nanopore MinION: http://www.ebi.ac.uk/efo/EFO_0008632
-  Illumina MiSeq: http://www.ebi.ac.uk/efo/EFO_0004205
-  IonTorrent: http://purl.obolibrary.org/obo/NCIT_C125894
-  Oxford Nanopore Sequencing: http://purl.obolibrary.org/obo/NCIT_C146818
-  Sanger dideoxy sequencing: http://purl.obolibrary.org/obo/NCIT_C19641
-
-sample_sequencing_technology2:
-  Illumina NextSeq 500: http://www.ebi.ac.uk/efo/EFO_0009173
-  Oxford Nanopore MinION: http://www.ebi.ac.uk/efo/EFO_0008632
-  Illumina MiSeq: http://www.ebi.ac.uk/efo/EFO_0004205
-  IonTorrent: http://purl.obolibrary.org/obo/NCIT_C125894
-  Oxford Nanopore Sequencing: http://purl.obolibrary.org/obo/NCIT_C146818
-  Sanger dideoxy sequencing: http://purl.obolibrary.org/obo/NCIT_C19641
-
-specimen_source:
-  nasopharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155831
-  oropharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155835
-  sputum: http://purl.obolibrary.org/obo/NCIT_C13278
-  bronchoalveolar lavage fluid: http://purl.obolibrary.org/obo/NCIT_C13195
-
-specimen_source2:
-  nasopharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155831
-  oropharyngeal swab: http://purl.obolibrary.org/obo/NCIT_C155835
-  sputum: http://purl.obolibrary.org/obo/NCIT_C13278
-  bronchoalveolar lavage fluid: http://purl.obolibrary.org/obo/NCIT_C13195
-
-host_species:
-  OLS-ontology: ncbitaxon
-
-virus_species:
-  OLS-ontology: ncbitaxon
-
-collection_location:
-  OLS-ontology: gaz
\ No newline at end of file
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