From 5fdfece97fb2d50a10eab5004a6467ec0097ece8 Mon Sep 17 00:00:00 2001
From: Pjotr Prins
Date: Fri, 6 Nov 2020 11:19:28 +0000
Subject: Uploader script improvements

---
 bh20sequploader/main.py | 5 +++--
 1 file changed, 3 insertions(+), 2 deletions(-)

(limited to 'bh20sequploader/main.py')

diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py
index f89b458..ea0fa70 100644
--- a/bh20sequploader/main.py
+++ b/bh20sequploader/main.py
@@ -49,7 +49,7 @@ sequence for enough overlap with the reference genome
                 failed = True
     except Exception as e:
         log.exception("Failed metadata QC")
-        failed = True
+        failed = True # continue with the FASTA checker
 
     target = []
     try:
@@ -64,13 +64,14 @@ sequence for enough overlap with the reference genome
             target[1] = ("reads_2."+target[1][0][6:], target[1][1], target[1][2])
 
         if do_qc and target[0][2] == 'text/fasta' and sample_id != target[0][1]:
-            raise ValueError("The sample_id field in the metadata must be the same as the FASTA header")
+            raise ValueError(f"The sample_id field in the metadata ({sample_id}) must be the same as the FASTA header ({target[0][1]})")
 
     except Exception as e:
         log.exception("Failed sequence QC")
         failed = True
 
     if failed:
+        log.debug("Bailing out!")
         exit(1)
 
     return target
-- 
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