From cc8f99d50236b7d0c365990398785ecc319323ea Mon Sep 17 00:00:00 2001
From: AndreaGuarracino
Date: Fri, 28 Aug 2020 10:47:48 +0200
Subject: qc_fasta returns also the seq_type; verified that only one FASTA is
 sent at a time; code cleaning

---
 bh20sequploader/main.py | 3 +++
 1 file changed, 3 insertions(+)

(limited to 'bh20sequploader/main.py')

diff --git a/bh20sequploader/main.py b/bh20sequploader/main.py
index d5de63e..80c33c8 100644
--- a/bh20sequploader/main.py
+++ b/bh20sequploader/main.py
@@ -40,7 +40,10 @@ def qc_stuff(metadata, sequence_p1, sequence_p2, do_qc=True):
         log.debug("FASTA/FASTQ QC" if do_qc else "Limited FASTA/FASTQ QC")
         target.append(qc_fasta(sequence_p1, check_with_mimimap2=do_qc))
         if sequence_p2:
+            if target[0][2] == 'text/fasta':
+                raise ValueError("It is possible to upload just one FASTA file at a time")
             target.append(qc_fasta(sequence_p2))
+
             target[0] = ("reads_1."+target[0][0][6:], target[0][1])
             target[1] = ("reads_2."+target[1][0][6:], target[0][1])
     except Exception as e:
-- 
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