From 79a85f846671d575eae6f83d96659c0e1be06011 Mon Sep 17 00:00:00 2001 From: Peter Amstutz Date: Thu, 14 May 2020 21:30:19 -0400 Subject: Switch fasta identifiers to use a real working URL Arvados-DCO-1.1-Signed-off-by: Peter Amstutz --- bh20seqanalyzer/main.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'bh20seqanalyzer/main.py') diff --git a/bh20seqanalyzer/main.py b/bh20seqanalyzer/main.py index 07e5f69..28b5e31 100644 --- a/bh20seqanalyzer/main.py +++ b/bh20seqanalyzer/main.py @@ -146,7 +146,7 @@ def start_pangenome_analysis(api, "class": "File", "location": "keep:%s/metadata.yaml" % v["portable_data_hash"] }) - inputobj["subjects"].append("http://arvados.org/keep:%s/sequence.fasta" % v["portable_data_hash"]) + inputobj["subjects"].append("http://collections.lugli.arvadosapi.com/c=%s/sequence.fasta" % v["portable_data_hash"]) run_workflow(api, analysis_project, pangenome_workflow_uuid, "Pangenome analysis", inputobj) -- cgit v1.2.3