From a40bafa5d568cd8bb1f07dd79ec0c0bafa898874 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Wed, 27 May 2020 07:50:06 -0500 Subject: DRY Blurb added --- bh20simplewebuploader/templates/blog.html | 1 + bh20simplewebuploader/templates/blurb.html | 10 ++++++++++ bh20simplewebuploader/templates/footer.html | 18 +++++++----------- doc/blog/using-covid-19-pubseq-part3.html | 28 ++++++++-------------------- doc/blog/using-covid-19-pubseq-part3.org | 10 ---------- 5 files changed, 26 insertions(+), 41 deletions(-) create mode 100644 bh20simplewebuploader/templates/blurb.html diff --git a/bh20simplewebuploader/templates/blog.html b/bh20simplewebuploader/templates/blog.html index 3069dd3..8cb6ce0 100644 --- a/bh20simplewebuploader/templates/blog.html +++ b/bh20simplewebuploader/templates/blog.html @@ -4,6 +4,7 @@ {% include 'banner.html' %} {% include 'menu.html' %} + {% include 'blurb.html' %} {% if embed %} {{ embed|safe }} diff --git a/bh20simplewebuploader/templates/blurb.html b/bh20simplewebuploader/templates/blurb.html new file mode 100644 index 0000000..7bfe2ab --- /dev/null +++ b/bh20simplewebuploader/templates/blurb.html @@ -0,0 +1,10 @@ +

+ This is the COVID-19 Public Sequence Resource (COVID-19 PubSeq) for + SARS-CoV-2 virus sequences. COVID-19 PubSeq is a repository for + sequences with a low barrier to entry for uploading sequence data + using best practices. I.e., data published with a creative commons + CC0 or CC-4.0 license with metadata using state-of-the art standards + and, perhaps most importantly, providing standardised workflows that + get triggered on upload, so that results are immediately available + in standardised data formats. +

diff --git a/bh20simplewebuploader/templates/footer.html b/bh20simplewebuploader/templates/footer.html index e72d1c5..e3923a7 100644 --- a/bh20simplewebuploader/templates/footer.html +++ b/bh20simplewebuploader/templates/footer.html @@ -4,19 +4,15 @@

ABOUT

+ {% include 'blurb.html' %}

- This a public repository created at the COVID-19 BioHackathon - that has a low barrier to entry for uploading sequence data using - best practices. I.e., data is published with a creative commons - 4.0 (CC-4.0) license with metadata using state-of-the art - standards and, perhaps most importantly, providing standardized - workflows that get triggered on upload, so that results are - immediately available in standardized data formats. The repository - will be maintained and expanded for the duration of the - pandemic. To contribute data simply upload it! To contribute code - and/or workflows see + The repository will be maintained and expanded for the + duration of the pandemic. To contribute data simply upload it! + To contribute code and/or workflows see the project - repository. For more information see the paper (WIP). + repository. For more information see + the FAQ and + the paper

diff --git a/doc/blog/using-covid-19-pubseq-part3.html b/doc/blog/using-covid-19-pubseq-part3.html index 94d5a2e..ac32717 100644 --- a/doc/blog/using-covid-19-pubseq-part3.html +++ b/doc/blog/using-covid-19-pubseq-part3.html @@ -3,7 +3,7 @@ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> - + COVID-19 PubSeq Uploading Data (part 3) @@ -248,39 +248,27 @@ for the JavaScript code in this tag.

Table of Contents

-
-

1 Uploading Data

+
+

1 Uploading Data

Work in progress!

- -

-As part of the COVID-19 Biohackathon 2020 we formed a working group to -create a COVID-19 Public Sequence Resource (COVID-19 PubSeq) for -Corona virus sequences. The general idea is to create a repository -that has a low barrier to entry for uploading sequence data using best -practices. I.e., data published with a creative commons 4.0 (CC-4.0) -license with metadata using state-of-the art standards and, perhaps -most importantly, providing standardised workflows that get triggered -on upload, so that results are immediately available in standardised -data formats. -

-
-

2 What does this mean?

+
+

2 What does this mean?

-
Created by Pjotr Prins (pjotr.public768 at thebird 'dot' nl) using Emacs org-mode and a healthy dose of Lisp!
Modified 2020-05-27 Wed 07:27. +
Created by Pjotr Prins (pjotr.public768 at thebird 'dot' nl) using Emacs org-mode and a healthy dose of Lisp!
Modified 2020-05-27 Wed 07:41.
diff --git a/doc/blog/using-covid-19-pubseq-part3.org b/doc/blog/using-covid-19-pubseq-part3.org index d088f78..1cd2db1 100644 --- a/doc/blog/using-covid-19-pubseq-part3.org +++ b/doc/blog/using-covid-19-pubseq-part3.org @@ -11,16 +11,6 @@ /Work in progress!/ -As part of the COVID-19 Biohackathon 2020 we formed a working group to -create a COVID-19 Public Sequence Resource (COVID-19 PubSeq) for -Corona virus sequences. The general idea is to create a repository -that has a low barrier to entry for uploading sequence data using best -practices. I.e., data published with a creative commons 4.0 (CC-4.0) -license with metadata using state-of-the art standards and, perhaps -most importantly, providing standardised workflows that get triggered -on upload, so that results are immediately available in standardised -data formats. - * Table of Contents :TOC:noexport: - [[#uploading-data][Uploading Data]] - [[#table-of-contents][Table of Contents]] -- cgit v1.2.3