From 7fc06d04a04a1737ae8b52f2e08c6698a8e5c721 Mon Sep 17 00:00:00 2001
From: AndreaGuarracino
Date: Sun, 15 Nov 2020 11:49:12 +0100
Subject: fixed typos in the integer cast

---
 scripts/create_sra_metadata/create_sra_metadata.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/scripts/create_sra_metadata/create_sra_metadata.py b/scripts/create_sra_metadata/create_sra_metadata.py
index 83a1a60..eebd9aa 100644
--- a/scripts/create_sra_metadata/create_sra_metadata.py
+++ b/scripts/create_sra_metadata/create_sra_metadata.py
@@ -178,7 +178,7 @@ for i, EXPERIMENT_PACKAGE in enumerate(EXPERIMENT_PACKAGE_SET):
                         missing_value_list.append('\t'.join([accession, 'host_sex', VALUE_text]))
             elif TAG_text in ['host_age', 'host age']:
                 if is_integer(VALUE_text):
-                    host_age = is_integer(VALUE_text)
+                    host_age = int(VALUE_text)
                     if host_age >= 0 and host_age < 110:
                         info_for_yaml_dict['host']['host_age'] = host_age
                         info_for_yaml_dict['host']['host_age_unit'] = 'http://purl.obolibrary.org/obo/UO_0000036'
-- 
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