From 5da793a8715f5b0b231ea4d531f030ed04bc878c Mon Sep 17 00:00:00 2001
From: lltommy
Date: Sun, 26 Apr 2020 22:23:21 +0200
Subject: Add enrichment vocabularies to git
---
semantic_enrichment/countries.ttl | 279 ++++++++++++++++++++++++++++++++++++++
semantic_enrichment/labels.ttl | 24 ++++
2 files changed, 303 insertions(+)
create mode 100644 semantic_enrichment/countries.ttl
create mode 100644 semantic_enrichment/labels.ttl
diff --git a/semantic_enrichment/countries.ttl b/semantic_enrichment/countries.ttl
new file mode 100644
index 0000000..0f364fc
--- /dev/null
+++ b/semantic_enrichment/countries.ttl
@@ -0,0 +1,279 @@
+@prefix ns1: .
+@prefix rdf: .
+@prefix rdfs: .
+@prefix xml: .
+@prefix xsd: .
+
+ rdfs:label "San Diego County" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-116.77 33.02)" .
+
+ rdfs:label "Snohomish County" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-121.71 48.04)" .
+
+ rdfs:label "Michigan" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-85.58 44.34)" .
+
+ rdfs:label "Wuhan" ;
+ ns1:P17 ;
+ ns1:P625 "Point(114.288055555 30.587222222)" .
+
+ rdfs:label "Kerala" ;
+ ns1:P17 ;
+ ns1:P625 "Point(76.972 8.5074)" .
+
+ rdfs:label "Illinois" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-89.0 40.0)" .
+
+ rdfs:label "Idaho" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-114.0 45.0)" .
+
+ rdfs:label "Washington" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-120.5 47.5)" .
+
+ rdfs:label "Nevada" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-117.0 39.0)" .
+
+ rdfs:label "Antioquia Department" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-75.566666666 6.216666666)" .
+
+ rdfs:label "Virginia" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-79.0 37.5)" .
+
+ rdfs:label "New York" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-75.0 43.0)" .
+
+ rdfs:label "Rhode Island" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-71.5 41.7)" .
+
+ rdfs:label "Maryland" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-76.7 39.0)" .
+
+ rdfs:label "Ohio" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-82.5 40.5)" .
+
+ rdfs:label "Pennsylvania" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-77.5 41.0)" .
+
+ rdfs:label "New Jersey" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-74.5 40.0)" .
+
+ rdfs:label "Indiana" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-86.216666666 39.933333333)" .
+
+ rdfs:label "Georgia" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-83.5 33.0)" .
+
+ rdfs:label "Texas" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-100.0 31.0)" .
+
+ rdfs:label "North Carolina" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-80.0 35.5)" .
+
+ rdfs:label "South Carolina" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-81.0 34.0)" .
+
+ rdfs:label "Shenzhen" ;
+ ns1:P17 ;
+ ns1:P625 "Point(114.054 22.535)" .
+
+ rdfs:label "Minnesota" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-94.0 46.0)" .
+
+ rdfs:label "Wisconsin" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-89.5 44.5)" .
+
+ rdfs:label "Iowa" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-93.0 42.0)" .
+
+ rdfs:label "Nebraska" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-100.0 41.5)" .
+
+ rdfs:label "Kansas" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-98.0 38.5)" .
+
+ rdfs:label "Missouri" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-92.5 38.5)" .
+
+ rdfs:label "Louisiana" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-92.0 31.0)" .
+
+ rdfs:label "Guangzhou" ;
+ ns1:P17 ;
+ ns1:P625 "Point(113.258976 23.128795)" .
+
+ rdfs:label "Ho Chi Minh City" ;
+ ns1:P17 ;
+ ns1:P625 "Point(106.62965 10.82302)",
+ "Point(106.633333333 10.816666666)" .
+
+ rdfs:label "Zhuozhou" ;
+ ns1:P17 ;
+ ns1:P625 "Point(115.99176 39.48873)" .
+
+ rdfs:label "Victoria" ;
+ ns1:P17 ;
+ ns1:P625 "Point(144.0 -37.0)" .
+
+ rdfs:label "Yunnan" ;
+ ns1:P17 ;
+ ns1:P625 "Point(101.5 24.5)" .
+
+ rdfs:label "Hangzhou" ;
+ ns1:P17 ;
+ ns1:P625 "Point(120.1675 30.25)" .
+
+ rdfs:label "San Francisco" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-122.416388888 37.7775)" .
+
+ rdfs:label "New Hampshire" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-71.5 44.0)" .
+
+ rdfs:label "Massachusetts" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-71.8 42.3)" .
+
+ rdfs:label "Connecticut" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-72.7 41.6)" .
+
+ rdfs:label "Hawaii" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-157.796388888 21.311388888)" .
+
+ rdfs:label "Florida" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-81.631666666 28.133333333)" .
+
+ rdfs:label "Arizona" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-111.656944 34.286667)" .
+
+ rdfs:label "KwaZulu-Natal" ;
+ ns1:P17 ;
+ ns1:P625 "Point(31.0 -29.0)" .
+
+ rdfs:label "Oregon" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-120.575 43.935833)" .
+
+ rdfs:label "Utah" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-111.5 39.5)" .
+
+ rdfs:label "Shanghai" ;
+ ns1:P17 ;
+ ns1:P625 "Point(121.466666666 31.166666666)" .
+
+ rdfs:label "Valencia" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-0.375 39.466666666)" .
+
+ rdfs:label "Beijing" ;
+ ns1:P17 ;
+ ns1:P625 "Point(116.391388888 39.905)" .
+
+ rdfs:label "California" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-120.0 37.0)" .
+
+ rdfs:label "France" ;
+ ns1:P17 ;
+ ns1:P625 "Point(2.0 47.0)" .
+
+ rdfs:label "Brazil" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-53.0 -14.0)" .
+
+ rdfs:label "South Africa" .
+
+ rdfs:label "Spain" .
+
+ rdfs:label "Finland" ;
+ ns1:P17 ;
+ ns1:P625 "Point(27.0 65.0)" .
+
+ rdfs:label "Sweden" ;
+ ns1:P17 ;
+ ns1:P625 "Point(15.0 61.0)" .
+
+ rdfs:label "Italy" ;
+ ns1:P17 ;
+ ns1:P625 "Point(12.5 42.5)" .
+
+ rdfs:label "Australia" .
+
+ rdfs:label "Greece" ;
+ ns1:P17 ;
+ ns1:P625 "Point(23.0 38.5)" .
+
+ rdfs:label "Peru" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-76.0 -9.4)" .
+
+ rdfs:label "Turkey" ;
+ ns1:P17 ;
+ ns1:P625 "Point(36.0 39.0)" .
+
+ rdfs:label "India" .
+
+ rdfs:label "Colombia" .
+
+ rdfs:label "Iran" ;
+ ns1:P17 ;
+ ns1:P625 "Point(53.0 32.0)" .
+
+ rdfs:label "Israel" ;
+ ns1:P17 ;
+ ns1:P625 "Point(35.0 31.0)" .
+
+ rdfs:label "Nepal" ;
+ ns1:P17 ;
+ ns1:P625 "Point(84.0 28.0)" .
+
+ rdfs:label "Taiwan" ;
+ ns1:P17 ;
+ ns1:P625 "Point(121.0 24.0)" .
+
+ rdfs:label "Vietnam" .
+
+ rdfs:label "South Korea" ;
+ ns1:P17 ;
+ ns1:P625 "Point(128.0 36.0)" .
+
+ rdfs:label "People's Republic of China" ;
+ ns1:P17 ;
+ ns1:P625 "Point(103.0 35.0)" .
+
+ rdfs:label "United States of America" ;
+ ns1:P17 ;
+ ns1:P625 "Point(-77.036666666 38.895)" .
+
diff --git a/semantic_enrichment/labels.ttl b/semantic_enrichment/labels.ttl
new file mode 100644
index 0000000..b4e5d1f
--- /dev/null
+++ b/semantic_enrichment/labels.ttl
@@ -0,0 +1,24 @@
+ "NCBI taxon" .
+ "geographic location" .
+ "sequence coverage" .
+ "Institution" .
+ "Author" .
+ "specimen from organism" .
+ "sequencing assay" .
+ "identifier" .
+ "host" .
+ "comment" .
+ "high throughput sequencer" .
+ "strain" .
+ "specimen collector" .
+ "Accession" .
+ "collection date" .
+ "Asymptomatic" .
+ "Symptomatic" .
+ "admitted to hospital" .
+ "discharged from hospital" .
+ "Dead" .
+ "Alive" .
+ "Healthy" .
+ "male".
+ "female" .
--
cgit v1.2.3