From 53bb39c7de934139ad9929ffb1b1772411233d80 Mon Sep 17 00:00:00 2001 From: Peter Amstutz Date: Thu, 20 Aug 2020 10:43:43 -0400 Subject: Update links to reflect latest workflow Arvados-DCO-1.1-Signed-off-by: Peter Amstutz --- bh20seqanalyzer/main.py | 2 +- bh20simplewebuploader/templates/resource.html | 8 ++++---- 2 files changed, 5 insertions(+), 5 deletions(-) diff --git a/bh20seqanalyzer/main.py b/bh20seqanalyzer/main.py index 13efbeb..11349e5 100644 --- a/bh20seqanalyzer/main.py +++ b/bh20seqanalyzer/main.py @@ -211,7 +211,7 @@ class SeqAnalyzer: most_recent_analysis = self.api.groups().list(filters=[['owner_uuid', '=', self.pangenome_analysis_project]], order="created_at desc").execute() for m in most_recent_analysis["items"]: - wf = self.get_workflow_output_from_project(m["uuid"], "pangenome-generate.cwl") + wf = self.get_workflow_output_from_project(m["uuid"], "arv-main.cwl") if wf is None: continue src = self.api.collections().get(uuid=wf["output_uuid"]).execute() diff --git a/bh20simplewebuploader/templates/resource.html b/bh20simplewebuploader/templates/resource.html index 9a905c2..fc52f13 100644 --- a/bh20simplewebuploader/templates/resource.html +++ b/bh20simplewebuploader/templates/resource.html @@ -8,11 +8,11 @@

All sequences project

-

All sequences (FASTA) relabled and deduplicated

+

All sequences (FASTA) relabled and deduplicated

Metadata (RDF) for all sequences

- +

All sequences in Graphical Fragment Assembly (GFA) - More about GFA

+

All sequences in Optimized Dynamic Genome/Graph Implementation (ODGI) - More about ODGI

+

SPARQL endpoint - Sample query for accessions -- cgit v1.2.3