From 4299c750728bbad4bdbf0311ff2a4b9c65d9883c Mon Sep 17 00:00:00 2001
From: AndreaGuarracino
Date: Thu, 27 Aug 2020 00:18:24 +0200
Subject: updated dependency from clustalw to minimap2; the genbank script no
 longer creates YAML/FASTA pairs for too short sequences

---
 .guix-deploy | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

(limited to '.guix-deploy')

diff --git a/.guix-deploy b/.guix-deploy
index e978e23..570ae10 100644
--- a/.guix-deploy
+++ b/.guix-deploy
@@ -6,5 +6,5 @@ export GUILE_LOAD_COMPILED_PATH=$GUIX_PROFILE/share/guile/site/3.0/
 
 ls $GUILE_LOAD_PATH
 
-env GUIX_PACKAGE_PATH=~/iwrk/opensource/guix/guix-bioinformatics/ $GUIX_PROFILE/bin/guix environment -C guix --ad-hoc git python python-flask python-pyyaml python-pycurl python-magic  nss-certs python-pyshex python-pyyaml --network openssl python-pyshex python-pyshexc clustalw python-schema-salad python-arvados-python-client --share=/export/tmp -- env TMPDIR=/export/tmp FLASK_ENV=development FLASK_RUN_PORT=5067 FLASK_APP=bh20simplewebuploader/main.py flask run
+env GUIX_PACKAGE_PATH=~/iwrk/opensource/guix/guix-bioinformatics/ $GUIX_PROFILE/bin/guix environment -C guix --ad-hoc git python python-flask python-pyyaml python-pycurl python-magic  nss-certs python-pyshex python-pyyaml --network openssl python-pyshex python-pyshexc minimap2 python-schema-salad python-arvados-python-client --share=/export/tmp -- env TMPDIR=/export/tmp FLASK_ENV=development FLASK_RUN_PORT=5067 FLASK_APP=bh20simplewebuploader/main.py flask run
 
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