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| author | Pjotr Prins | 2021-01-01 12:27:00 +0000 |
|---|---|---|
| committer | Pjotr Prins | 2021-01-01 12:27:00 +0000 |
| commit | a86633121cd92e37b2353f4bba8f2c37fa970d05 (patch) | |
| tree | 5bd64dc5c71633fc842dc3092f7fabef24750ca4 /workflows/pull-data/genbank/README.md | |
| parent | 2c6181c7eb86c0285928a434a37401d6680f9f79 (diff) | |
| download | bh20-seq-resource-a86633121cd92e37b2353f4bba8f2c37fa970d05.tar.gz bh20-seq-resource-a86633121cd92e37b2353f4bba8f2c37fa970d05.tar.lz bh20-seq-resource-a86633121cd92e37b2353f4bba8f2c37fa970d05.zip | |
genbank-fetch-ids.py
Diffstat (limited to 'workflows/pull-data/genbank/README.md')
| -rw-r--r-- | workflows/pull-data/genbank/README.md | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/workflows/pull-data/genbank/README.md b/workflows/pull-data/genbank/README.md index f442b5d..d7c294b 100644 --- a/workflows/pull-data/genbank/README.md +++ b/workflows/pull-data/genbank/README.md @@ -4,7 +4,7 @@ # --- get list of IDs already in PubSeq sparql-fetch-ids > pubseq_ids.txt # --- get list of missing genbank IDs -genbank-fetch-ids --skip pubseq_ids.txt > genbank_ids.txt +genbank-fetch-ids.py --skip pubseq_ids.txt > genbank_ids.txt # --- fetch XML update-from-genbank.py --ids genbank_ids.txt --outdir ~/tmp/genbank # --- Transform to YAML and FASTA |