ccwl/scripts, branch v0.5.0 Concise Common Workflow Language (mirror of https://github.com/arunisaac/ccwl) http://git.systemreboot.net/ccwl/atom?h=v0.5.0 2025-12-02T01:23:50+00:00 scripts: Use raise-exception instead of scm-error. 2025-12-02T01:23:50+00:00 Arun Isaac 2025-12-02T01:23:50+00:00 urn:sha1:5f6e0d93bb08446d2c6f99484523697a2bda7b4d scripts: Do not wrap simple condition in condition. 2025-12-02T01:23:37+00:00 Arun Isaac 2025-12-02T01:23:37+00:00 urn:sha1:c937863fd417aa786d4faad9af6f5af466ee397d scripts: Add --output option. 2025-12-02T01:19:11+00:00 Arun Isaac 2025-12-02T01:18:04+00:00 urn:sha1:8eb8fde7cf6da312074f6704b111ea8e4a9df3b7 scripts: Only guard load function for ccwl-violation. 2025-12-02T01:01:21+00:00 Arun Isaac 2025-12-02T00:46:15+00:00 urn:sha1:ceb555dd124dc18e2dad747b9afb2987cdbb91db scripts: Spin out compilation into separate function. 2025-12-02T00:59:46+00:00 Arun Isaac 2025-12-02T00:44:58+00:00 urn:sha1:9a7283b249abd5fec085b50fe1dd15fa3cfd045f scripts: Move options to separate variable. 2025-12-01T23:50:24+00:00 Arun Isaac 2025-12-01T23:50:24+00:00 urn:sha1:7287162ffc4b2cd9740cec84f5e34a03ad52e4b6 ccwl: Implement js-expression. 2024-03-22T01:48:25+00:00 Arun Isaac 2024-03-22T01:29:40+00:00 urn:sha1:e430937727b881be2b2428ad0f09a32ea0aaf198 js-expression corresponds to ExpressionTool in the CWL specification. * ccwl/ccwl.scm (<js-expression>): New type. (js-expression): New macro. (function-inputs, function-outputs, function-object): Support <js-expression> objects. (function-input-keys): Mention <js-expression> objects in docstring. * ccwl/cwl.scm (function->cwl, workflow->cwl-scm): Support <js-expression> objects. (command->cwl-scm): Move staging requirements handling to ... (staging-requirements): ... this new function. (js-expression->cwl, js-expression->cwl-scm): New functions. * ccwl/graphviz.scm (function->dot): Support <js-expression> objects. (command->graph): Abstract to ... (single-node-workflow->graph): ... this new function. (js-expression->dot, js-expression->graph): New functions. * scripts/ccwl (main): Support <js-expression> objects. * doc/ccwl.skb (Cookbook){Javascript expressions via ExpressionTool}: New section. * doc/js-expression-iota.scm: New file. scripts: Use unified function terminology. 2024-03-22T00:00:03+00:00 Arun Isaac 2024-03-22T00:00:03+00:00 urn:sha1:d005c17106add8bd9ab07eddc30e9cf9b17de544 Call workflows and commands by our unified notion of "function". This makes it more succinct when adding more kinds of functions. * ccwl/cwl.scm (workflow-or-command->cwl): Rename to function->cwl. * ccwl/graphviz.scm (workflow-or-command->dot): Rename to function->dot. * scripts/ccwl (main): Use function->cwl and function->dot. scripts: When ccwl crashes, say so explicitly. 2023-11-18T23:48:50+00:00 Arun Isaac 2023-11-18T23:48:50+00:00 urn:sha1:cd2be030233d529d0319a4b73dd9dbc0eea007f3 * scripts/ccwl (main): When ccwl crashes, say so explicitly. scripts: Raise exception when file does not return supported object. 2023-09-28T22:51:21+00:00 Arun Isaac 2023-09-28T22:50:05+00:00 urn:sha1:d58e5585b62bd284a7e27045e748c2cf1d31a649 * scripts/ccwl (main): Raise exception when file returns neither workflow nor command.