bh20-seq-resource/workflows/tools/normalize, branch generate-cwl Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis http://git.systemreboot.net/bh20-seq-resource/atom?h=generate-cwl 2021-01-28T18:45:52+00:00 Moving tools out of submodules (sorry!) 2021-01-28T18:45:52+00:00 Pjotr Prins 2021-01-28T18:45:52+00:00 urn:sha1:8a7e79d6daa06da4d8ca2a391bae0a00124a2ed3 GenBank: Fix normalization and depth differences with original records 2021-01-08T10:33:13+00:00 Pjotr Prins 2021-01-08T10:33:13+00:00 urn:sha1:b112b3203e34ea61dfdf802bce5036f938eaa774 mapping: no longer requires specimen file for genbank output 2021-01-04T10:25:36+00:00 Pjotr Prins 2021-01-04T10:25:36+00:00 urn:sha1:f9f27a787fef0ad58c1ae465d8ba1ee4634083ae mapping sample_species using regex 2021-01-04T09:40:54+00:00 Pjotr Prins 2021-01-04T09:40:54+00:00 urn:sha1:3593b3f6a835f6c5927cbb1cc79e3db3c5d0053a Started on normalization 2021-01-04T08:58:38+00:00 Pjotr Prins 2021-01-04T08:58:38+00:00 urn:sha1:1c4e055b8a9dc53b7fdbdf12d4b0a7e877fbc2ef