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<title>bh20-seq-resource/workflows/fastq2fasta, branch generate-cwl</title>
<subtitle>Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis</subtitle>
<id>http://git.systemreboot.net/bh20-seq-resource/atom?h=generate-cwl</id>
<link rel='self' href='http://git.systemreboot.net/bh20-seq-resource/atom?h=generate-cwl'/>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/'/>
<updated>2020-09-05T09:51:16+00:00</updated>
<entry>
<title>increased the quality filter threshold</title>
<updated>2020-09-05T09:51:16+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-09-05T09:51:16+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=556263eae40c2371f85b482494472e165ae4d1d5'/>
<id>urn:sha1:556263eae40c2371f85b482494472e165ae4d1d5</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Adjust QC filter and relabel output sequence with sample_id</title>
<updated>2020-06-22T18:25:45+00:00</updated>
<author>
<name>Peter Amstutz</name>
</author>
<published>2020-06-22T18:23:40+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=76883d02e6073f990ea980dad1f8cf21121255ff'/>
<id>urn:sha1:76883d02e6073f990ea980dad1f8cf21121255ff</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Move workflows into main repo</title>
<updated>2020-04-20T16:55:18+00:00</updated>
<author>
<name>Peter Amstutz</name>
</author>
<published>2020-04-20T16:55:18+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=d781e42c9adac07253cb928ae66e9b7314710267'/>
<id>urn:sha1:d781e42c9adac07253cb928ae66e9b7314710267</id>
<content type='text'>
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz &lt;peter.amstutz@curii.com&gt;
</content>
</entry>
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