<feed xmlns='http://www.w3.org/2005/Atom'>
<title>bh20-seq-resource/scripts, branch master</title>
<subtitle>Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis</subtitle>
<id>http://git.systemreboot.net/bh20-seq-resource/atom?h=master</id>
<link rel='self' href='http://git.systemreboot.net/bh20-seq-resource/atom?h=master'/>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/'/>
<updated>2021-01-28T19:02:17+00:00</updated>
<entry>
<title>Jetson test sequence</title>
<updated>2021-01-28T19:02:17+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2021-01-28T19:02:17+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=b0bf91571b562bbbd824dc0c8b3964a5b7a94f36'/>
<id>urn:sha1:b0bf91571b562bbbd824dc0c8b3964a5b7a94f36</id>
<content type='text'>
</content>
</entry>
<entry>
<title>genbank: moving script into workflow space</title>
<updated>2020-12-31T09:58:30+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-12-31T09:58:30+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=d1a554001e62cb13da3498296a68092d8bff7824'/>
<id>urn:sha1:d1a554001e62cb13da3498296a68092d8bff7824</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Ignores</title>
<updated>2020-12-30T15:16:48+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-12-30T15:16:48+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=b974db8f4e3fcc8bc4af3ade25b9e1bf5fbc37f1'/>
<id>urn:sha1:b974db8f4e3fcc8bc4af3ade25b9e1bf5fbc37f1</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Genbank: comments</title>
<updated>2020-12-30T15:14:48+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-12-30T15:14:48+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=573e0eb0df5914994dc61b819a3ce14dc8c39398'/>
<id>urn:sha1:573e0eb0df5914994dc61b819a3ce14dc8c39398</id>
<content type='text'>
</content>
</entry>
<entry>
<title>added abPOA workflow; typos</title>
<updated>2020-11-21T22:06:05+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-11-21T22:06:05+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=1e9a735e84a8e89099b1de2ec66c56669caf6cc8'/>
<id>urn:sha1:1e9a735e84a8e89099b1de2ec66c56669caf6cc8</id>
<content type='text'>
</content>
</entry>
<entry>
<title>removed provider_sample_id references</title>
<updated>2020-11-15T19:24:16+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-11-15T19:24:16+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=803f1b57ae07277792a5d93792230d2b453e9bd5'/>
<id>urn:sha1:803f1b57ae07277792a5d93792230d2b453e9bd5</id>
<content type='text'>
</content>
</entry>
<entry>
<title>fix sequencing_coverage</title>
<updated>2020-11-15T13:23:09+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-11-15T13:23:09+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=d9165d64840daca222305a6bf8d414a77a3cff21'/>
<id>urn:sha1:d9165d64840daca222305a6bf8d414a77a3cff21</id>
<content type='text'>
</content>
</entry>
<entry>
<title>fixed typos in the integer cast</title>
<updated>2020-11-15T10:49:12+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-11-15T10:49:12+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=7fc06d04a04a1737ae8b52f2e08c6698a8e5c721'/>
<id>urn:sha1:7fc06d04a04a1737ae8b52f2e08c6698a8e5c721</id>
<content type='text'>
</content>
</entry>
<entry>
<title>added a check on host_age</title>
<updated>2020-11-15T10:36:25+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-11-15T10:36:25+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=72e77fda220e939676d10fd8505fd15517e99702'/>
<id>urn:sha1:72e77fda220e939676d10fd8505fd15517e99702</id>
<content type='text'>
</content>
</entry>
<entry>
<title>added a check on host_age</title>
<updated>2020-11-14T22:30:53+00:00</updated>
<author>
<name>AndreaGuarracino</name>
</author>
<published>2020-11-14T22:30:53+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=ba8c23625dea3d869eab821007e8f5db2eaf9dfe'/>
<id>urn:sha1:ba8c23625dea3d869eab821007e8f5db2eaf9dfe</id>
<content type='text'>
</content>
</entry>
</feed>
